mutect

Here are 4 public repositories matching this topic...

gatk-workflows / gatk4-somatic-snvs-indels

This repo has been archived, these workflows are still available in the GATK repository under the scripts directory. The workflows are also organized in Dockstore in the GATK Best Practices Workflows collection.

tumor gatk variants mutect

Updated Mar 9, 2020
WDL

IARCbioinfo / mutect-nf

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Mutect pipeline with Nextflow

nextflow mutect

Updated Apr 30, 2024
Nextflow

RRafiee / GenomeAnalysisToolkit

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Genome Analysis Toolkit

genome gatk shell-script fastq bwa genome-analysis mutect bamtools bam2fastq

Updated Dec 13, 2018
R

rhshah / basicfiltering

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Basic filtering scripts for various mutation calling tools

ngs mutect pindel vardict

Updated Sep 15, 2017
Python

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mutect

Here are 4 public repositories matching this topic...

gatk-workflows / gatk4-somatic-snvs-indels

IARCbioinfo / mutect-nf

RRafiee / GenomeAnalysisToolkit

rhshah / basicfiltering

Improve this page

Add this topic to your repo