A set of tootkit for dealing with COI amplicons using Pacbio sequencing platform

rMETL - realignment-based Mobile Element insertion detection Tool for Long read

Inter-sample analysis of SQANTI classifications

Hormiphora californensis genome annotation and supplemental materials related to the genome assembly.

SMP: A Salmonella Methylation analysis Pipeline

De novo repeat inference from long reads

The `pacmill` python package is a bioinformatics pipeline that is developed to process microbial 16S amplicon sequencing data and produce PDF reports detailing taxonomical assignments along with other statistics.

A workflow for processing CCS reads of AMF to ASVs using DADA2

LRSDAY: Long-read Sequencing Data Analysis for Yeasts

Long read based human genomic structural variation detection with cuteSV

rMETL - realignment-based Mobile Element insertion detection Tool for Long read

ruby gem for analyzing pacbiohifi genomes and reads

pacbiohifi report classifier for any sequencing startups

bash based fasta conversion of pacbiohifi reads and filtering.

pacbiohifi view using awk

pacbiohifi read analyzer using recursion

polyATGC pacbio/oxford nanopore estimator

pacbio/oxford nanopore long reads repeat coverage estimation

go driven pacbiohifi sam sort for browser requests and caching

extracting specific motifs from pacbio and oxford nanopore long reads.