Analysis of SNPs that have the greatest impact of appearance of mammary gland tumour in dogs.
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Updated
May 24, 2023 - R
Analysis of SNPs that have the greatest impact of appearance of mammary gland tumour in dogs.
BIOI500 - Advanced Bioinformatics final project at Loyola University Chicago.
Introduction to Human Population Genetics
Setup and starter script for the PLINK R plugin.
esohinformatics
This project leverages PLINK for GWAS Quality Control, focusing on SNP analysis and PCA for ancestry insights, showcasing the vital role of bioinformatics in enhancing population genetics research.
Very basic Snakemake workflow
Smarter database repository
Fast and minimal PLINK file processing with numba
A python script to remove duplicate snps from plink files and recode the resultant files into plink binaries free of duplicate snps
gwas workflow from raw intensity data to in-silico functional mapping
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