1000 Genomes Project Metadata R Package
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Updated
Dec 21, 2022 - R
1000 Genomes Project Metadata R Package
A fast and scalable CUDA implementation to conduct highly parallelized evolutionary tests on large scale genomic data.
GTM and t-SNE classification and clustering of 1000 Genomes Project populations
Bioinformatics workflow that identifies mutational overlaps using data from the 1000 genomes project
📙 Explore 1000 Genomes variant data with JavaScript.
A PBWT-based light index for UK Biobank scale genotype data.
GWAS Pre-Processing Pipeline
Find risk snp in the LD region of GWAS snps by convolutional neural network
Predicting 1000 Genomes population using PCA and a random forest classifier
Pipeline with lots of user input for processing SNP data towards ADMIXTURE and/or imputation
A pipeline utilizing PCA on 1000 genomes and WGS data from your own samples to determine or validate ancestry of an individual.
Concordance Validation across Experiments
The main aim of this little project is to compare the European allele frequencies of the 1k genomes project with the gnomad frequencies.
A Python script that generate population genotype frequency file from 1000G data
An extendable parser for vcf files written in C++
BIOI500 - Advanced Bioinformatics final project at Loyola University Chicago.
Snakemake workflow to test μ-PBWT against PBWT and Syllable-PBWT
This repository provides tools to train and evaluate the Genome-AC-GAN model for generating realistic artificial human genomes.
Attain and plot the allele frequency distribution of SNPs based on our merged data from 1000 Genome Project.
Add a description, image, and links to the 1000genomes topic page so that developers can more easily learn about it.
To associate your repository with the 1000genomes topic, visit your repo's landing page and select "manage topics."