cBioPortal for Cancer Genomics
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Updated
Jul 3, 2024 - Java
cBioPortal for Cancer Genomics
Therapeutics Commons: Artificial Intelligence Foundation for Therapeutic Science
A comprehensive classification tool based on pure transcriptomics for precision medicine
Services and guidelines for normalizing genes
Scripts and info for defining cohorts in CPRD Aurum
📦 Non-parametric Causal Effects Based on Modified Treatment Policies 🔮
High performance data storage for importing, querying and transforming variants.
Extended Joint Models for Longitudinal and Survival Data
Code to accompany the paper: ”ProteinNetworkSight efficiently transforms co-expressed protein lists into interactive networks and offers suggestions for their modifications”
Services and guidelines for normalizing drug and other therapy terms
Services and guidelines for normalizing disease terms
mity: A highly sensitive mitochondrial variant analysis pipeline for whole genome sequencing data
This repository is dedicated to advancing precision medicine through Python-based bioinformatics analyses. It emphasizes genomic data processing, analysis of genetic variability, and the development of predictive models that tailor healthcare to individual genetic profiles.
WebGen Vertically Integrated Project
Precision Medicine Knowledge Graph (PrimeKG)
Patient-Specific Modeling in Python
TxGNN: Zero-shot prediction of therapeutic use with geometric deep learning and clinician centered design
Easy to use web interface for biologists to look for genetic variants and understand their deleteriousness using DITTO scores.
Deep learning-based tissue compositions and cell-type-specific gene expression analysis with tissue-adaptive autoencoder (TAPE)
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