Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities
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Updated
Jun 19, 2024 - C#
Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities
Short Text Topic Modeling, JAVA
Construction, quantification, and visualization of proteoform families
Code to generate the PTMTorrent dataset
Pipeline for analysing and visualising CyTOF datasets, with a focus on PTM signalling networks.
An ensemble-based approach for prediction of protein S-nitrosylation sites integrating supervised word embedding and embedding from protein language model
Proteomics Mass Spectrometry Datasets for Machine Learning
Comet-PTM, branch of Comet MS/MS
PTM-X: a prediction tool for Post-Translational Modification cross-talk
Jupyter notebook examples of SCOP3P REST API services
Lightweight polynomial texture map viewer based on PySide2 and OpenGL
Some phosphoproteomics useful notebooks and sources
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