Quality control tool for the BioModels repository of biochemical models
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Updated
Dec 15, 2023 - Python
Quality control tool for the BioModels repository of biochemical models
WES Analysis scripts for "Immune determinants of response to neoadjuvant chemo-radiation in esophageal adenocarcinoma" publication
Collect outputs from BCCDC-PHL/routine-sequence-qc pipeline for usage by BCCDC-PHL/routine-sequence-qc-site
CroCoDeEL is a tool that detects cross-sample contamination in shotgun metagenomic data
Refactoring of an open project quality control app for ELISAS
University Thesis - Automation and validation tool development for digital processes.
A Snakemake workflow for quality control assessment of Illumina NGS data using FastQC and MultiQC
Base framework for creating semantic QC dashboards
This is a self-learning project on good practices in software development, deployment and securing. Featuring a trivial Django application operating in a Docker network
instructions, python and R code for generating lava lamp plots of kmer coverage
Python implementation to calc mappability-sensitive cross-correlation for fragment length estimation and quality control for ChIP-Seq.
Collect Routine QC for Nanopore Sequence Data
Detect RNA contamination in human Illumina DNA-seq experiments
Automated and friendly RNA-seq analysis (deprecated)
Collect QC data from Carbapenemase-Producing Organism (CPO) genomic analyses
NGS_Multi_Heal simplifies quality analysis, trimming, and healing of paired-end reads
A small snakemake pipeline to perform quality analysis of RNA-Seq data with FastQC.
A program which gets a worklists created in Notion to analizes, to improve and reduce the reworking on factory.
Display segmentation results over MRI scans in Jupyter notebooks.
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