Project for the Transcriptomic course of "Bioinformatics for Computational Genomics" MSc
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Updated
Sep 3, 2023 - HTML
Project for the Transcriptomic course of "Bioinformatics for Computational Genomics" MSc
scRNA Analysis tutorials
In the past several months, I have been having multiple interview done. Almost all the HM gave me some kind of challenge projects/analysis work. All were performed using public available datasets. Topics are mostly very diverse. Essence are all the same. How to utilize genomics/bioinformatics approaches to tackle a certain question, mostly biolo…
Repo linked to our recent publication in Science Advances
An example of immunopipe
add any phylogenetically based transcriptome evolutionary index (TEI) to single-cell data objects
scRNA-seq analysis 2022 workshop hosted by UMICH's CDS-SR
NASQAR: A web-based platform for High-throughput sequencing data analysis and visualization
Enables cellxgene to generate violin, stacked violin, stacked bar, heatmap, volcano, embedding, dot, track, density, 2D density, sankey and dual-gene plot in high-resolution SVG/PNG format. It also performs differential gene expression analysis and provides a Command Line Interface (CLI) for advanced users to perform analysis using python and R.
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