📦 🐳 Dockerfiles and documentation on tools for public health bioinformatics
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Updated
May 24, 2024 - Dockerfile
📦 🐳 Dockerfiles and documentation on tools for public health bioinformatics
Docker image to get DeepLabCutCore running on cloud GPUs.
Docker and Singularity definition files for CSDMS software
A collection of Dockerfiles to facilitate reproducibility across computing environments.
Docker image of CAT12 (standalone version)
Repository with all my container recipes 👩🍳
HIPAA & GDPR compliant ready Mongo Database with percona-server.
A set of docker build scripts used to build the docker images (which I import into singularity) for my processing chains.
Build and run singularity images within a Docker container.
Apptainer in Docker!
This repository will provide support for researchers, scientists, and other members of the MITgcm climate science community to build, run, and interpret results of models in portable units of software (docker containers).
Build Docker container for Homer software and optionally convert to Singularity/Apptainer for running on HPC system
Build Docker container for TopHat2 and (optionally) convert to Apptainer/Singularity.
Build Docker container for Subread package and (optionally) convert to Apptainer/Singularity.
Build Docker container for Bowtie 2 and (optionally) convert to Apptainer/Singularity.
Build Docker container for FASTX Toolkit and (optionally) convert to Apptainer/Singularity.
Build Docker container for RseQC and (optionally) convert to Apptainer/Singularity.
Build Docker container for BWA and (optionally) convert to Apptainer/Singularity.
Build Docker container for Picard Tools and (optionally) convert to Apptainer/Singularity.
Add a description, image, and links to the singularity topic page so that developers can more easily learn about it.
To associate your repository with the singularity topic, visit your repo's landing page and select "manage topics."