ML model to predict SPARQL query execution times from time series data
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Updated
May 18, 2017 - Python
ML model to predict SPARQL query execution times from time series data
Ansible playbook for installing SLURM based cluster on CLIMB (Cloud Infrastructure for Microbial Bioinformatics)
Not the slurm job dispatcher you need, but the one you deserve.
Submit functions and shell scripts to torque and slurm clusters or local machines using python.
Submit slurm cluster job(Sbatch) inside python and avoid shell script. Submission cmd can be customized to add more options.
Basically all ingredients for building HPC style clusters are here.
🧰 ToolKit to launch COMOKIT on HPC
Slurm job submission in Python
An implementation based on SLURM and OpenMPI for big data handling using a Raspberry Pi cluster
Generic Snakemake profile to set up SLURM integration
This workflow performs a metatranscriptomics and bulk RNAseq analysis from the sequencing output data to the differential expression analyses.
LaunchPad is a light-weighted Slurm job launcher designed for hyper-parameter search.
Control your SLURM jobs via SSH using Python (WORK IN PROGRESS)
Efficient Datamodules Customized for the Mila / CC clusters
This is an importable python package that provides an Enum containing SLURM sbatch/srun environment variables.
Common functions and infrastructure built during my phd projects
Slack bot to interface with Slurm and other utlilities
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