snps
Here are 15 public repositories matching this topic...
Wrapper scripts for TASSEL (Trait Analysis by aSSociation, Evolution and Linkage) and UNEAK (Universal Network Enabled Analysis Kit) v3.0 Genotyping by Sequencing (GBS) analysis pipelines
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Jun 5, 2024 - Shell
A program for pulling flanking sequences from a reference genome for a SNP
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Apr 30, 2024 - Shell
Find shared SNPs between different microarray chips
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Mar 27, 2018 - Shell
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Feb 3, 2022 - Shell
Pipelines to identify polymorphic genetic and methylation variants
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Feb 19, 2024 - Shell
Pipeline to assemble paired-end sequencing reads, annotate the resulting contigs, compare the genome content across sequences and determine the variants (SNPs).
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Aug 22, 2023 - Shell
Building a fully automized pipeline for population genomic and conservation genomic analyses.
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Apr 13, 2023 - Shell
Estimate age of single-nucleotide polymorphisms from genomes
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Jun 3, 2024 - Shell
Mapping, snps calling, phylogeny
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Oct 2, 2019 - Shell
This repository will house the scripts used to analyze and represent genomic and temperature data for my dissertation.
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Oct 2, 2022 - Shell
Automated imputation pipeline for arbitrary dataset and reference panels.
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Nov 9, 2019 - Shell
Scripts for file processing and analysis in phylogenetics and phylogeography
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Jan 6, 2021 - Shell
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