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somatic

Here are 3 public repositories matching this topic...

SherineAwad / SomaticMutations

This a snakemake pipeline to detect Somatic mutations (GATK4 and Mutect2)

snakemake mutations somatic mutect2 gatk4

Updated Feb 21, 2022
Python

ammodramus / ebsom

Empirical Bayes somatic variant calling

somatic-variants variant-calling somatic

Updated Oct 25, 2019
Python

juliawiggeshoff / VCFpytools

Assortment of VCF processing scripts

python bioinformatics vcf strelka somatic variant-allele-frequency

Updated Apr 23, 2024
Python

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