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Achievement: Pair ExtraordinaireAchievement: Pull Sharkx3Achievement: YOLOAchievement: StarstruckAchievement: Arctic Code Vault Contributor

Achievements

Achievement: Pair ExtraordinaireAchievement: Pull Sharkx3Achievement: YOLOAchievement: StarstruckAchievement: Arctic Code Vault Contributor

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  1. ilastik/ilastik ilastik/ilastik Public

    ilastik-shell, applets, and workflows to string them together.

    Python 352 130

  2. BodenmillerGroup/imctools BodenmillerGroup/imctools Public archive

    Tools to handle IMC data

    Python 22 16

  3. BodenmillerGroup/ImcSegmentationSnakemake BodenmillerGroup/ImcSegmentationSnakemake Public template

    The repository for the Snakemake implementation of the ImcSegmentationPipeline

    Python 4 2

  4. BodenmillerGroup/neighbouRhood BodenmillerGroup/neighbouRhood Public archive

    Adds an R implementation for the HistoCAT neightbourhood analysis that runs from CellProfiler output.

    R 7 6

  5. BodenmillerGroup/SpheroidPublication BodenmillerGroup/SpheroidPublication Public

    This contains the workflows to reproduce all analyses from the Spheroid paper.

    Makefile 2

  6. CellProfiler/CellProfiler CellProfiler/CellProfiler Public

    An open-source application for biological image analysis

    Python 917 376