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@wassermanlab

Wasserman Lab

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  1. ExplaiNN ExplaiNN Public

    ExplaiNN: interpretable and transparent neural networks for genomics

    Jupyter Notebook 39 5

  2. Variant_catalogue_pipeline Variant_catalogue_pipeline Public

    Variant catalogue pipeline

    HTML 22 9

  3. TFFM TFFM Public

    TFFM framework

    Python 11 5

  4. JASPAR-UCSC-tracks JASPAR-UCSC-tracks Public

    Code and data used to create the JASPAR UCSC Genome Browser tracks data hub

    Python 11 5

  5. BiasAway BiasAway Public

    Python 7 5

  6. TF-Binding-Transfer-Learning TF-Binding-Transfer-Learning Public

    IPython notebooks and scripts for performing the different transfer learning experiments

    Jupyter Notebook 7 3

Repositories

Showing 10 of 44 repositories
  • variome Public
    wassermanlab/variome’s past year of commit activity
    Python 3 2 0 1 Updated Jul 2, 2024
  • Variant_catalogue_pipeline Public

    Variant catalogue pipeline

    wassermanlab/Variant_catalogue_pipeline’s past year of commit activity
    HTML 22 Apache-2.0 9 0 0 Updated Jun 22, 2024
  • scheduler Public
    wassermanlab/scheduler’s past year of commit activity
    Python 0 0 0 0 Updated Jun 3, 2024
  • JASPAR-inference-tool Public

    Code and data used by the JASPAR profile inference tool

    wassermanlab/JASPAR-inference-tool’s past year of commit activity
    Python 6 MIT 1 0 0 Updated Mar 13, 2024
  • plp Public
    wassermanlab/plp’s past year of commit activity
    Jupyter Notebook 0 1 0 0 Updated Mar 10, 2024
  • IBVL Public
    wassermanlab/IBVL’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Feb 23, 2024
  • OnTarget Public
    wassermanlab/OnTarget’s past year of commit activity
    Python 2 MIT 1 0 0 Updated Aug 21, 2023
  • ExplaiNN Public

    ExplaiNN: interpretable and transparent neural networks for genomics

    wassermanlab/ExplaiNN’s past year of commit activity
    Jupyter Notebook 39 MIT 5 2 0 Updated Aug 5, 2023
  • gene2wordclouds Public
    wassermanlab/gene2wordclouds’s past year of commit activity
    3 MIT 1 1 0 Updated Jul 4, 2023
  • TF-Binding-Matrix Public

    A sparse 3D matrix of 2,503,732 bound and open regions across 175 transcription factors and 70 cells/tissues

    wassermanlab/TF-Binding-Matrix’s past year of commit activity
    Python 3 MIT 2 0 0 Updated Jun 1, 2023
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