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Compile from source on MacOS failed #31

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jianshu93 opened this issue May 13, 2020 · 3 comments
Closed

Compile from source on MacOS failed #31

jianshu93 opened this issue May 13, 2020 · 3 comments

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@jianshu93
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error: Found argument '...etc...' which wasn't expected, or isn't valid in this context

@wwood
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wwood commented May 13, 2020 via email

@jianshu93
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The static compile version works well I am just using this one for now. Thanks! A question about coverm cluster command, no output for the cluster file and the representative genome of each cluster?drep can do this.

Thanks,

Jianshu

@wwood
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wwood commented May 18, 2020

Hi,

The cluster command is actually implemented in https://github.com/wwood/galah - there I've added a number of options for the cluster output - see wwood/galah#3 You can try them if you compile from the master branch. I won't release a new version however until the fastani issue ParBLiSS/FastANI#63 is fixed (or there's a workaround).

@wwood wwood closed this as completed May 18, 2020
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