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Update Nodes and Components
docs(CONTRIBUTING): clarify CAS auth stack status and OIDC relationship CAS components (cas, userdetails, apikeys) remain deployed even with OIDC. OIDC is a supported auth protocol on top of CAS, not a replacement.
revert(CONTRIBUTING): revert CAS row wording for review
docs(IMPROVEMENT-PLAN): mark Phase 5 sub-phases 5.1–5.7 as complete Update all sub-phase statuses with summary of edits applied. Add KB methodology note to CONTRIBUTING.md documenting the evidence-first review process.
docs(Before-Start-Your-LA-Installation): add Ansible version prerequisite Document that ala-install requires Ansible 2.17.3 core / 10.3.0 community, sourced from ala-install README. Note la-toolkit manages this automatically.
docs(Infrastructure-Requirements): fix dead Spark 0.9.1 hardware link Replace spark.apache.org/docs/0.9.1/hardware-provisioning.html (HTTP 404) with /docs/latest/hardware-provisioning.html (verified live, Spark 4.1.2).
docs(Introduction): add legacy notice for Grails 2/3 BuildConfig.groovy plugin method
docs(ALA-Internationalization-(i18n)): add legacy notice for Grails 2/3 BuildConfig.groovy plugin method
docs(Troubleshooting): add legacy notice for biocache-store debug instructions
docs(CONTRIBUTING): correct CAS row — CAS still in use, OIDC is newer alternative not replacement
docs(Name-indexer): add legacy notices for Vagrant tutorial and biocache-store reindex commands
docs(Data-mappings): add legacy note for STEP 5 biocache-store processing commands
docs(IMPROVEMENT-PLAN): expand Phase 5 into sub-phases 5.1–5.7 for KB-assisted audit
docs(LA-Quick-Start-Guide): fix broken path to image-service/files/licence_mappings.csv Was: ansible/roles/image-servicefiles/licence_mappings.csv (missing slash) Now: ansible/roles/image-service/files/licence_mappings.csv KB evidence: ala-install/ansible/image-service.yml (rel 0.572) — role name is image-service; standard Ansible role structure is roles/<name>/files/
docs(Requirements): update Ubuntu 18.04 → 20.04 and add legacy notice for Vagrant KB evidence: ala-install/README.md (rel 0.722) — well tested on 20.04; ala-install/README.md (rel 0.631) — Vagrant section explicitly marked "Deprecated"
docs(Infrastructure-Requirements): update Ubuntu version from 18.04 to 20.04 KB evidence: ala-install/README.md — "currently well tested on Ubuntu 20.04" (relevance: 0.722 from la_toolkit_kb MCP query)
docs(plan): update phase statuses to done
docs: promote la-toolkit as primary install method in Quick Start Replace ala-demo recommendation with la-toolkit as primary route. Keep ala-install and generator as secondary options. Remove ala-demo and Docker review paragraph (obsolete).
docs: add legacy notices for biocache-store pages Mark Jenkins, Data-ingestion, Data-management, Sample-And-Index as legacy biocache-store. Update Infrastructure-Requirements to reference la-toolkit as recommended install method.
docs: add contributing spec, improvement plan, fix typos, add .gitignore - Add CONTRIBUTING.md with editing guidelines and URL policy - Add IMPROVEMENT-PLAN.md with phased improvement roadmap - Add .gitignore (exclude drafts/ and old-probably-safe-to-delete/) - Fix English typos across 11 files (practices, occurrence, information, allowlist, your/you, different, independent, amount, want to)
Improved SSH doc
Trying to fix newlines
Remove title
First version
Update nexus urls
Update LA Portal references for consistency
Add contribution status emoji to upstream changes
Add a warning about non-generalized local changes. Duplication of efforts
Add Forks for Manager and examples
Add link to Forking