feat: Add MedCAT OPCS-4 service #18
Merged
Conversation
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Introduce a MedCAT OPCS-4 service to handle OPCS annotation codes, corresponding to interventions and procedures. The new service mirrors the structure and behaviour of the ICD-10 equivalent, exposing only the OPCS-4 labels among the annotations generated by the underlying MedCAT model, relying on the existence of a 'cui2opcs4' mapping in the latter's concept database. This commit introduces the new model type and service, adjusts the existing tests accordingly, extends the Docker Compose stack with a 'medcat-opcs4' Docker service, and updates the Grafana/Prometheus configuration to take it into account. Signed-off-by: Phoevos Kalemkeris <phoevos.kalemkeris@ucl.ac.uk>
baixiac
approved these changes
Aug 29, 2025
Member
baixiac
left a comment
baixiac
left a comment
There was a problem hiding this comment.
LGTM, just one minor comment.
Signed-off-by: Phoevos Kalemkeris <phoevos.kalemkeris@ucl.ac.uk>
phoevos
force-pushed
the
feature-phoevos-opcs
branch
from
3a93bbf to
b4ae76b
Compare
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Introduce a MedCAT OPCS-4 service to handle OPCS annotation codes, corresponding to interventions and procedures. The new service mirrors the structure and behaviour of the ICD-10 equivalent, exposing only the OPCS-4 labels among the annotations generated by the underlying MedCAT model, relying on the existence of a
cui2opcs4mapping in the latter's concept database. This commit introduces the new model type and service, adjusts the existing tests accordingly, extends the Docker Compose stack with a 'medcat-opcs4' Docker service, and updates the Grafana/Prometheus configuration to take it into account.