Skip to content

FD JSR from T3 utils with images inside graph's nodes #25

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Open
wants to merge 4 commits into
base: main
Choose a base branch
from
Open

FD JSR from T3 utils with images inside graph's nodes #25

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
4 commits
Select commit Hold shift + click to select a range
9650ae0
added imgs to FD nodes
NellyMitnik Nov 22, 2023
65c92f5
Update README.md
NellyMitnik Nov 22, 2023
4458a6a
Update README.md
NellyMitnik Nov 26, 2023
d218ece
removed a redundant node and increased edge penwidth
NellyMitnik Nov 26, 2023
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
The table of contents is too big for display.
Diff view
Diff view
  •  
  •  
  •  
Binary file added FluxDiagrams/FD_JSR_T3/2BF_xmr_2036_flux_diagrams/bar_ROPs/2BF(1)_2.0_s.png
View file
Open in desktop
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
89 changes: 89 additions & 0 deletions ...Diagrams/FD_JSR_T3/2BF_xmr_2036_flux_diagrams/flux_diagrams/2BF(1)/flux_diagram_2.0_s.dot
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -0,0 +1,89 @@
digraph G {
label="Flux diagram at 2.0 s, ROP range: [3.94e-20, 2.08e-05] mol/cm³/s)";
"2BF(1)" [fillcolor="#DCE5F4", fontsize=8, penwidth=4.0, style=filled, xlabel="1.79e-02"];
"C5H5O(25)" [fontsize=8, penwidth=2.612174003285728, xlabel="6.59e-08"];
"NC3H7(24)" [fontsize=8, penwidth=2.188045771722405, xlabel="1.44e-09"];
"2BF(1)" -> "C5H5O(25)" [arrowhead=vee, fontsize=8, label="1.0\n- NC3H7(24)", penwidth=4.0];
"2BF(1)" -> "NC3H7(24)" [arrowhead=vee, fontsize=8, label="1.0\n- C5H5O(25)", penwidth=4.0];
"NC3H7O2(27)" [fontsize=8, penwidth=2.315484363086707, xlabel="4.54e-09"];
"NC3H7(24)" -> "NC3H7O2(27)" [arrowhead=vee, fontsize=8, label="0.7\n+ O2(16)", penwidth=3.9531118597733945];
"C2H4(30)" [fontsize=8, penwidth=2.4850666138707735, xlabel="2.09e-08"];
"CH3(29)" [fontsize=8, penwidth=2.401348802017171, xlabel="9.85e-09"];
"NC3H7(24)" -> "C2H4(30)" [arrowhead=vee, fontsize=8, label="0.3\n- CH3(29)", penwidth=3.86596075946327];
"NC3H7(24)" -> "CH3(29)" [arrowhead=vee, fontsize=8, label="0.3\n- C2H4(30)", penwidth=3.86596075946327];
"CH3O2(42)" [fontsize=8, penwidth=2.392472901616007, xlabel="9.09e-09"];
"CH3(29)" -> "CH3O2(42)" [arrowhead=vee, fontsize=8, label="0.1\n+ O2(16)", penwidth=3.7785081320393186];
"2BF_radical_3(8)" [fontsize=8, penwidth=2.036769852662828, xlabel="3.68e-10"];
"CH4(72)" [fontsize=8, penwidth=2.1435799395523945, xlabel="9.63e-10"];
"CH3(29)" -> "2BF_radical_3(8)" [arrowhead=vee, fontsize=8, label="5.3e-03\n+ 2BF(1)\n- CH4(72)", penwidth=3.4116450697646012];
"CH3(29)" -> "CH4(72)" [arrowhead=vee, fontsize=8, label="5.3e-03\n+ 2BF(1)\n- 2BF_radical_3(8)", penwidth=3.4116450697646012];
"H2O(75)" [fontsize=8, penwidth=2.090287591196239, xlabel="5.96e-10"];
"CH4(72)" -> "CH3(29)" [arrowhead=vee, fontsize=8, label="4.2e-11\n+ OH_rad(18)\n- H2O(75)", penwidth=1.3219434735452613];
"CH4(72)" -> "H2O(75)" [arrowhead=vee, fontsize=8, label="4.2e-11\n+ OH_rad(18)\n- CH3(29)", penwidth=1.3219434735452613];
"C2H5(35)" [fontsize=8, penwidth=1.8514000200063356, xlabel="6.91e-11"];
"C6H6O(65)" [fontsize=8, penwidth=2.0824718125393273, xlabel="5.55e-10"];
"2BF_radical_3(8)" -> "C2H5(35)" [arrowhead=vee, fontsize=8, label="7.1e-03\n- C6H6O(65)", penwidth=3.4452085029301682];
"2BF_radical_3(8)" -> "C6H6O(65)" [arrowhead=vee, fontsize=8, label="7.1e-03\n- C2H5(35)", penwidth=3.4452085029301682];
"C8H10O(84)" [fontsize=8, penwidth=2.027507188097893, xlabel="3.38e-10"];
"hydroperoxyl(17)" [fontsize=8, penwidth=2.556360482655869, xlabel="3.98e-08"];
"2BF_radical_3(8)" -> "C8H10O(84)" [arrowhead=vee, fontsize=8, label="4.1e-03\n+ O2(16)\n- hydroperoxyl(17)", penwidth=3.3833583478961424];
"2BF_radical_3(8)" -> "hydroperoxyl(17)" [arrowhead=vee, fontsize=8, label="4.1e-03\n+ O2(16)\n- C8H10O(84)", penwidth=3.3833583478961424];
"H2O2(124)" [fontsize=8, penwidth=1.9872940288030387, xlabel="2.35e-10"];
"hydroperoxyl(17)" -> "2BF_radical_3(8)" [arrowhead=vee, fontsize=8, label="3.4e-03\n+ 2BF(1)\n- H2O2(124)", penwidth=3.3638947492663833];
"hydroperoxyl(17)" -> "H2O2(124)" [arrowhead=vee, fontsize=8, label="3.4e-03\n+ 2BF(1)\n- 2BF_radical_3(8)", penwidth=3.3638947492663833];
"C8H10O(94)" [fontsize=8, penwidth=1.801785192332098, xlabel="4.42e-11"];
"C8H10O(84)" -> "C8H10O(94)" [arrowhead=vee, fontsize=8, label="1.0e-07", penwidth=2.195096798414099];
"C6H6O(1513)" [fontsize=8, penwidth=0.6750911447314258, xlabel="1.71e-15"];
"C6H6O(65)" -> "C6H6O(1513)" [arrowhead=vee, fontsize=8, label="1.3e-05", penwidth=2.7411355148848533];
"C2H5(35)" -> "C2H4(30)" [arrowhead=vee, fontsize=8, label="7.4e-03\n+ O2(16)\n- hydroperoxyl(17)", penwidth=3.449363013738345];
"C2H5(35)" -> "hydroperoxyl(17)" [arrowhead=vee, fontsize=8, label="7.4e-03\n+ O2(16)\n- C2H4(30)", penwidth=3.449363013738345];
"C2H5O2(78)" [fontsize=8, penwidth=1.8624871929700146, xlabel="7.64e-11"];
"C2H5(35)" -> "C2H5O2(78)" [arrowhead=vee, fontsize=8, label="1.4e-03\n+ O2(16)", penwidth=3.2645507829701628];
"C2H5O2(78)" -> "C2H4(30)" [arrowhead=vee, fontsize=8, label="2.5e-04\n- hydroperoxyl(17)", penwidth=3.0694974726307223];
"C2H5O2(78)" -> "hydroperoxyl(17)" [arrowhead=vee, fontsize=8, label="2.5e-04\n- C2H4(30)", penwidth=3.0694974726307223];
"CH2O(97)" [fontsize=8, penwidth=2.1080928371049925, xlabel="7.00e-10"];
"CH3CHO(119)" [fontsize=8, penwidth=1.5768731519797812, xlabel="5.81e-12"];
"CH3O2(42)" -> "CH2O(97)" [arrowhead=vee, fontsize=8, label="1.9e-15\n+ C2H3(92)\n- CH3CHO(119)", penwidth=0.2];
"CH3O2(42)" -> "CH3CHO(119)" [arrowhead=vee, fontsize=8, label="1.9e-15\n+ C2H3(92)\n- CH2O(97)", penwidth=0.2];
"CH2CHO(115)" [fontsize=8, penwidth=1.5736927099632012, xlabel="5.65e-12"];
"H_rad(19)" [fontsize=8, penwidth=1.7295321149786738, xlabel="2.30e-11"];
"C2H4(30)" -> "CH2CHO(115)" [arrowhead=vee, fontsize=8, label="1.0e-09\n+ O(73)\n- H_rad(19)", penwidth=1.6795506821455728];
"C2H4(30)" -> "H_rad(19)" [arrowhead=vee, fontsize=8, label="1.0e-09\n+ O(73)\n- CH2CHO(115)", penwidth=1.6795506821455728];
"C2H3(92)" [fontsize=8, penwidth=1.000517889814375, xlabel="3.22e-14"];
"C2H4(30)" -> "C2H3(92)" [arrowhead=vee, fontsize=8, label="9.9e-10\n+ OH_rad(18)\n- H2O(75)", penwidth=1.6759920533736867];
"C2H4(30)" -> "H2O(75)" [arrowhead=vee, fontsize=8, label="9.9e-10\n+ OH_rad(18)\n- C2H3(92)", penwidth=1.6759920533736867];
"HCO(149)" [fontsize=8, penwidth=0.8280579445302036, xlabel="6.79e-15"];
"C2H4(30)" -> "CH3(29)" [arrowhead=vee, fontsize=8, label="4.6e-10\n+ O(73)\n- HCO(149)", penwidth=1.5894377866407674];
"C2H4(30)" -> "HCO(149)" [arrowhead=vee, fontsize=8, label="4.6e-10\n+ O(73)\n- CH3(29)", penwidth=1.5894377866407674];
"C2H4O1-2(210)" [fontsize=8, penwidth=1.5734867102761336, xlabel="5.64e-12"];
"OH_rad(18)" [fontsize=8, penwidth=1.5914581795871836, xlabel="6.63e-12"];
"C2H4(30)" -> "C2H4O1-2(210)" [arrowhead=vee, fontsize=8, label="2.7e-10\n+ hydroperoxyl(17)\n- OH_rad(18)", penwidth=1.5291712566106568];
"C2H4(30)" -> "OH_rad(18)" [arrowhead=vee, fontsize=8, label="2.7e-10\n+ hydroperoxyl(17)\n- C2H4O1-2(210)", penwidth=1.5291712566106568];
"C2H4(30)" -> "C2H3(92)" [arrowhead=vee, fontsize=8, label="2.0e-10\n+ CH3(29)\n- CH4(72)", penwidth=1.4942009953620132];
"C2H4(30)" -> "CH4(72)" [arrowhead=vee, fontsize=8, label="2.0e-10\n+ CH3(29)\n- C2H3(92)", penwidth=1.4942009953620132];
"C3H6(33)" [fontsize=8, penwidth=2.555738729087293, xlabel="3.96e-08"];
"NC3H7O2(27)" -> "C3H6(33)" [arrowhead=vee, fontsize=8, label="0.6\n- hydroperoxyl(17)", penwidth=3.939224199258321];
"NC3H7O2(27)" -> "hydroperoxyl(17)" [arrowhead=vee, fontsize=8, label="0.6\n- C3H6(33)", penwidth=3.939224199258321];
"C3H5-A(151)" [fontsize=8, penwidth=1.0881273166628027, xlabel="7.09e-14"];
"C3H6(33)" -> "C3H5-A(151)" [arrowhead=vee, fontsize=8, label="3.0e-07\n+ O2(16)\n- hydroperoxyl(17)", penwidth=2.3147644387955335];
"C3H6(33)" -> "hydroperoxyl(17)" [arrowhead=vee, fontsize=8, label="3.0e-07\n+ O2(16)\n- C3H5-A(151)", penwidth=2.3147644387955335];
"C3H6(33)" -> "C2H4(30)" [arrowhead=vee, fontsize=8, label="2.7e-08\n+ H_rad(19)\n- CH3(29)", penwidth=2.0464706596372055];
"C3H6(33)" -> "CH3(29)" [arrowhead=vee, fontsize=8, label="2.7e-08\n+ H_rad(19)\n- C2H4(30)", penwidth=2.0464706596372055];
"C5H5O3(28)" [fontsize=8, penwidth=1.7073248967845482, xlabel="1.89e-11"];
"C5H5O(25)" -> "C5H5O3(28)" [arrowhead=vee, fontsize=8, label="4.0e-04\n+ O2(16)", penwidth=3.12170970095839];
"C4H3O2(83)" [fontsize=8, penwidth=1.8299002323373423, xlabel="5.69e-11"];
"C5H5O(25)" -> "C4H3O2(83)" [arrowhead=vee, fontsize=8, label="2.6e-04\n+ O2(16)\n- CH2O(97)", penwidth=3.074598296079152];
"C5H5O(25)" -> "CH2O(97)" [arrowhead=vee, fontsize=8, label="2.6e-04\n+ O2(16)\n- C4H3O2(83)", penwidth=3.074598296079152];
"C5H5O3(41)" [fontsize=8, penwidth=0.9802057204380754, xlabel="2.68e-14"];
"C5H5O(25)" -> "C5H5O3(41)" [arrowhead=vee, fontsize=8, label="2.2e-04\n+ O2(16)", penwidth=3.057274015018226];
"C6H8O(125)" [fontsize=8, penwidth=1.5214776119856948, xlabel="3.53e-12"];
"C5H5O(25)" -> "C6H8O(125)" [arrowhead=vee, fontsize=8, label="5.3e-05\n+ CH3(29)", penwidth=2.896574174876073];
"C6H8O(134)" [fontsize=8, penwidth=1.515827799335507, xlabel="3.35e-12"];
"C5H5O(25)" -> "C6H8O(134)" [arrowhead=vee, fontsize=8, label="4.3e-05\n+ CH3(29)", penwidth=2.8732545753104417];
"C5H5O2(1688)" [fontsize=8, penwidth=0.19999999999999973, xlabel="2.36e-17"];
"C5H5O(25)" -> "C5H5O2(1688)" [arrowhead=vee, fontsize=8, label="4.0e-05\n+ hydroperoxyl(17)\n- OH_rad(18)", penwidth=2.86564497968172];
"C5H5O(25)" -> "OH_rad(18)" [arrowhead=vee, fontsize=8, label="4.0e-05\n+ hydroperoxyl(17)\n- C5H5O2(1688)", penwidth=2.86564497968172];
"C5H4O2(1788)" [fontsize=8, penwidth=1.5142583641790928, xlabel="3.31e-12"];
"C5H5O(25)" -> "C5H4O2(1788)" [arrowhead=vee, fontsize=8, label="3.5e-05\n+ O2(16)\n- OH_rad(18)", penwidth=2.8490362024306353];
"C5H5O(25)" -> "OH_rad(18)" [arrowhead=vee, fontsize=8, label="3.5e-05\n+ O2(16)\n- C5H4O2(1788)", penwidth=2.8490362024306353];
}
Binary file added ...D_JSR_T3/2BF_xmr_2036_flux_diagrams/flux_diagrams/2BF(1)/flux_diagram_2.0_s.png
View file
Open in desktop
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading