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pSI.data 1.0: companion data for pSI

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@DunderChief DunderChief released this 02 Nov 20:49

Companion data for pSI, formerly the pSI.data package (never on CRAN because of its size). These files are unchanged from the 2014 originals that the Dougherty lab website distributed; the SHA256SUMS file lists their checksums.

  • mouse.rda: list mouse with psi.in, psi.in.filter, psi.out, 16,907 genes x 35 mouse cell types/regions (bacTRAP, as of October 2013).
  • human.rda: list human with developmental.periods (16,866 genes x 60 region-by-period columns) and young.adulthood (16,866 x 6), each holding psi.in and psi.out from BrainSpan RNA-seq.
  • pSI.data_1.0.tar.gz: the original R source package with documentation.
  • SHA256SUMS: checksums of the three files.

Load with load("mouse.rda"), or let pSI 1.2.0 fetch, verify and cache them for you with psi_data("mouse").