Repository navigation
Companion data for pSI, formerly the pSI.data package (never on CRAN because of its size). These files are unchanged from the 2014 originals that the Dougherty lab website distributed; the SHA256SUMS file lists their checksums.
mouse.rda: listmousewithpsi.in,psi.in.filter,psi.out, 16,907 genes x 35 mouse cell types/regions (bacTRAP, as of October 2013).human.rda: listhumanwithdevelopmental.periods(16,866 genes x 60 region-by-period columns) andyoung.adulthood(16,866 x 6), each holdingpsi.inandpsi.outfrom BrainSpan RNA-seq.pSI.data_1.0.tar.gz: the original R source package with documentation.SHA256SUMS: checksums of the three files.
Load with load("mouse.rda"), or let pSI 1.2.0 fetch, verify and cache them for you with psi_data("mouse").