Skip to content

pSI.data 1.0: companion data for pSI

Latest

Choose a tag to compare

@DunderChief DunderChief released this 02 Nov 20:49
· 3 commits to main since this release

Companion data for pSI, formerly the pSI.data package (never on CRAN because of its size). These files are unchanged from the 2014 originals that the Dougherty lab website distributed; the SHA256SUMS file lists their checksums.

  • mouse.rda: list mouse with psi.in, psi.in.filter, psi.out, 16,907 genes x 35 mouse cell types/regions (bacTRAP, as of October 2013).
  • human.rda: list human with developmental.periods (16,866 genes x 60 region-by-period columns) and young.adulthood (16,866 x 6), each holding psi.in and psi.out from BrainSpan RNA-seq.
  • pSI.data_1.0.tar.gz: the original R source package with documentation.
  • SHA256SUMS: checksums of the three files.

Load with load("mouse.rda"), or let pSI 1.2.0 fetch, verify and cache them for you with psi_data("mouse").