Planning for data harmonization rule generation
Create data types and Biocompute provenance for data ingestion and analysis pipelines
Develop workflow for data appropriateness, integrity, and QC check; setup scripts for automatic execution of QC tools and algorithms
Documentation of data intake procedures
Work with VA scientists to examine, understand, redesign, optimize data processes
Develop data model for PredictMod initially with Synthea data; extend data model for datatypes (ongoing)
Documentation of data model
Sequence aggregation: aggregate all sequences
Annotation aggregation: evaluate, generate and aggregate annotations
Populate data warehouse
Make data available for algorithms and tools