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Huwenbo Shi edited this page Jun 11, 2026 · 3 revisions

Welcome to the sceps wiki!

Wiki pages Pages 7

Home
Step 0a. Obtain gene level MAGMA association statistics
Step 0b. Preprocess scRNA seq data
Step 1. Estimate scEPS statistics at each individual cell neighborhood
Step 2. Cluster cell neighborhoods into approximately independent blocks
Step 3. Aggregate scEPS statistics for groups of cell neighborhoods
Step 4. Calculate the correlation between scEPS statistics and other attributes

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