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Merged
DavidHerreros merged 29 commits into from
Jul 19, 2024
Merged

Preparing release 1.2.0 #14

DavidHerreros merged 29 commits into from
Jul 19, 2024

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@DavidHerreros DavidHerreros commented Jul 18, 2024

Installation:

  • Some unexpected installation behaviours have been fixed
  • Open3D compilation and installation is now fully independent from the system libraries

HetSIREN:

  • Mixed precision implementation
  • Pose and CTF decoupling architecture
  • Improved focused training workflow

Zernike3Deep:

  • Pose and CTF decoupling
  • Improved way to compute atomic model regularizations (dihedrals and bonds)

DavidHerreros and others added 29 commits April 17, 2024 11:02
@DavidHerreros
Allow choosing GPU when generating maps with HetSIREN
d539469
@DavidHerreros
Fix GPU selection in HetSIREN map generation
89c8c97
@DavidHerreros
Check Nvidia drivers instead of cuda version
bef927d
@DavidHerreros
Install Cuda on environment to simplify Open3D installation
8d5aad4
@DavidHerreros
Improved flexconsensus and new cost functions
ed35bb7
@DavidHerreros
Some improvement and preparations for HetSIREN
2c0d330
@DavidHerreros
Fix filename when reading metadata in generator template
2d5f3dc
@DavidHerreros
Tensorboard selection when training FlexConsensus
e34f250
@DavidHerreros
Better default values
0f140a5
@DavidHerreros
Try adding extra dependencies
7749c4b
@DavidHerreros
Thrust as dependency
78f1fd9
@DavidHerreros
Towards dependence-less Open3D installation
d8728d7
@DavidHerreros
Alow GUI and Webrtc compilation
26888d2
@DavidHerreros
Channel order to download correctly the packages
98af2ff
@DavidHerreros
Working independent installation
18e8400
@DavidHerreros
Improve version compare and fix GCC version
52303fb
@DavidHerreros
Add -y when removing the environments
5ee99d0
@DavidHerreros
HetSIREN with disentanglement
0d3aacc
@DavidHerreros
HetSIREN better focused analysis
7f617ea
@DavidHerreros
HetSIREN with mixed precision and CTF decoupling for Zernike3Deep
2529dcf
@DavidHerreros
Merge pull request #12 from I2PC/hetsiren_mixed_precision
265d2ee 
Mixed precision implementation for HetSIREN
@DavidHerreros
Merge remote-tracking branch 'refs/remotes/origin/devel' into improve…
3c6d17a 
…d_installation

# Conflicts:
#	tensorflow_toolkit/scripts/predict_map_het_siren.py
@DavidHerreros
Merge pull request #13 from I2PC/improved_installation
be36d0d 
Preparing release
@DavidHerreros
Increase version for new release
af1fdff
@DavidHerreros
Merge remote-tracking branch 'origin/devel' into devel
724187a
@DavidHerreros
Update and rename README.rst to README.md
e6de212
@DavidHerreros
New README.md
786206a
@DavidHerreros
Merge remote-tracking branch 'origin/devel' into devel
2bbeb91
@DavidHerreros
Update README.md
9775eea
@DavidHerreros DavidHerreros merged commit b9b6799 into master Jul 19, 2024
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@DavidHerreros