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1 change: 0 additions & 1 deletion .github/workflows/ci_pipeline.yml
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Expand Up @@ -267,7 +267,6 @@ jobs:
sphinx-build -b html docs/source docs/build/html
mkdir -p docs/build/html/coverage
mv htmlcov/* docs/build/html/coverage/.
cp -r data docs/build/html/

# - name: Build html II
# if: "!contains(github.event.head_commit.message, '[CI-no-benchmarks]')"
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4 changes: 2 additions & 2 deletions docs/source/projects/doc_SDC_showdown.rst
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Expand Up @@ -4,7 +4,7 @@ Full code: `pySDC/projects/SDC_showdown/SDC_timing_Fisher.py <https://github.com

Results:

.. image:: ../data/timings_SDC_variants_Fisher.png
.. image:: ../../../data/timings_SDC_variants_Fisher.png
:scale: 100 %


Expand All @@ -14,5 +14,5 @@ Full code: `pySDC/projects/SDC_showdown/SDC_timing_GrayScott.py <https://github.

Results:

.. image:: ../data/timings_SDC_variants_GrayScott.png
.. image:: ../../../data/timings_SDC_variants_GrayScott.png
:scale: 100 %
8 changes: 4 additions & 4 deletions docs/source/projects/doc_asympconv.rst
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@@ -1,14 +1,14 @@
Results:

.. image:: ../data/conv_test_niter_NS3.png
.. image:: ../../../data/conv_test_niter_NS3.png
:width: 19%

.. image:: ../data/conv_test_niter_NS2.png
.. image:: ../../../data/conv_test_niter_NS2.png
:width: 19%

.. image:: ../data/conv_test_niter_Linf_diffusion.png
.. image:: ../../../data/conv_test_niter_Linf_diffusion.png
:width: 19%

.. image:: ../data/conv_test_niter_Linf_advection.png
.. image:: ../../../data/conv_test_niter_Linf_advection.png
:width: 19%

10 changes: 5 additions & 5 deletions docs/source/projects/doc_fput.rst
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Expand Up @@ -4,13 +4,13 @@ Full code: `pySDC/projects/Hamiltonian/fput.py <https://github.com/Parallel-in-T

Results:

.. literalinclude:: ./data/fput_out.txt
.. literalinclude:: ../../../data/fput_out.txt

.. image:: ../data/fput_hamiltonian.png
.. image:: ../../../data/fput_hamiltonian.png
:scale: 100 %
.. image:: ../data/fput_positions.png
.. image:: ../../../data/fput_positions.png
:scale: 100 %
.. image:: ../data/fput_energy.png
.. image:: ../../../data/fput_energy.png
:scale: 100 %
.. image:: ../data/fput_energy_full.png
.. image:: ../../../pySDC/projects/Hamiltonian/data/fput_energy_full.png
:scale: 100 %
6 changes: 3 additions & 3 deletions docs/source/projects/doc_fwsw_acoustic.rst
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@@ -1,10 +1,10 @@
Results:

.. image:: ../data/convergence.png
.. image:: ../../../data/convergence.png
:width: 19%

.. image:: ../data/iteration.png
.. image:: ../../../data/iteration.png
:width: 19%

.. image:: ../data/multiscale-K2-M2.png
.. image:: ../../../data/multiscale-K2-M2.png
:width: 19%
2 changes: 1 addition & 1 deletion docs/source/projects/doc_fwsw_boussinesq.rst
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@@ -1,4 +1,4 @@
Results (generated with `plotgmrescounter_boussinesq.py <https://github.com/Parallel-in-Time/pySDC/blob/master/pySDC/projects/FastWaveSlowWave/plotgmrescounter_boussinesq.py>`_):

.. image:: ../data/boussinesq.png
.. image:: ../../../data/boussinesq.png
:width: 19%
14 changes: 7 additions & 7 deletions docs/source/projects/doc_fwsw_theory.rst
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@@ -1,22 +1,22 @@
Results:

.. image:: ../data/stifflimit-specrad.png
.. image:: ../../../data/stifflimit-specrad.png
:width: 19%

.. image:: ../data/stifflimit-norm.png
.. image:: ../../../data/stifflimit-norm.png
:width: 19%

.. image:: ../data/stability-K3-M3.png
.. image:: ../../../data/stability-K3-M3.png
:width: 19%

.. image:: ../data/stab_vs_k_resolved.png
.. image:: ../../../data/stab_vs_k_resolved.png
:width: 19%

.. image:: ../data/stab_vs_k_unresolved.png
.. image:: ../../../data/stab_vs_k_unresolved.png
:width: 19%

.. image:: ../data/phase-K3-M3.png
.. image:: ../../../data/phase-K3-M3.png
:width: 19%

.. image:: ../data/ampfactor-K3-M3.png
.. image:: ../../../data/ampfactor-K3-M3.png
:width: 19%
4 changes: 2 additions & 2 deletions docs/source/projects/doc_hamiltonian_simple.rst
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Expand Up @@ -4,10 +4,10 @@ Full code: `pySDC/projects/Hamiltonian/simple_problems.py <https://github.com/Pa

Results:

.. image:: ../data/harmonic_hamiltonian.png
.. image:: ../../../data/harmonic_hamiltonian.png
:scale: 50 %

.. image:: ../data/henonheiles_hamiltonian.png
.. image:: ../../../data/henonheiles_hamiltonian.png
:scale: 50 %


2 changes: 1 addition & 1 deletion docs/source/projects/doc_matrixPFASST_matrix.rst
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Expand Up @@ -4,4 +4,4 @@ Full code: `pySDC/projects/matrixPFASST/compare_to_matrixbased.py <https://githu

Results:

.. literalinclude:: ./data/comparison_matrix_vs_nomat_detail.txt
.. literalinclude:: ../../../data/comparison_matrix_vs_nomat_detail.txt
2 changes: 1 addition & 1 deletion docs/source/projects/doc_matrixPFASST_propagator.rst
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Expand Up @@ -4,4 +4,4 @@ Full code: `pySDC/projects/matrixPFASST/compare_to_propagator.py <https://github

Results:

.. literalinclude:: ./data/comparison_matrix_vs_propagator_detail.txt
.. literalinclude:: ../../../data/comparison_matrix_vs_propagator_detail.txt
6 changes: 3 additions & 3 deletions docs/source/projects/doc_parallelSDC_nonlinear.rst
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Expand Up @@ -4,11 +4,11 @@ Full code: `pySDC/projects/parallelSDC/nonlinear_playground.py <https://github.c

Results:

.. literalinclude:: ./data/parallelSDC_nonlinear_out.txt
.. literalinclude:: ../../../data/parallelSDC_nonlinear_out.txt

Results:

.. image:: ../data/parallelSDC_fisher.png
.. image:: ../../../data/parallelSDC_fisher.png
:scale: 100 %

Full code: `pySDC/projects/parallelSDC/newton_vs_sdc.py <https://github.com/Parallel-in-Time/pySDC/blob/master/pySDC/projects/parallelSDC/newton_vs_sdc.py>`_
Expand All @@ -17,5 +17,5 @@ Full code: `pySDC/projects/parallelSDC/newton_vs_sdc.py <https://github.com/Para

Results:

.. image:: ../data/parallelSDC_fisher_newton.png
.. image:: ../../../data/parallelSDC_fisher_newton.png
:scale: 100 %
8 changes: 4 additions & 4 deletions docs/source/projects/doc_parallelSDC_preconditioner.rst
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Expand Up @@ -4,15 +4,15 @@ Full code: `pySDC/projects/parallelSDC/preconditioner_playground.py <https://git

Results:

.. image:: ../data/parallelSDC_preconditioner_heat.png
.. image:: ../../../data/parallelSDC_preconditioner_heat.png
:scale: 100 %

.. image:: ../data/parallelSDC_preconditioner_advection.png
.. image:: ../../../data/parallelSDC_preconditioner_advection.png
:scale: 100 %

.. image:: ../data/parallelSDC_preconditioner_vanderpol.png
.. image:: ../../../data/parallelSDC_preconditioner_vanderpol.png
:scale: 100 %

.. image:: ../data/parallelSDC_preconditioner_fisher.png
.. image:: ../../../data/parallelSDC_preconditioner_fisher.png
:scale: 100 %

8 changes: 4 additions & 4 deletions docs/source/projects/doc_parallelSDC_preconditioner_MPI.rst
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Expand Up @@ -4,15 +4,15 @@ Full code: `pySDC/projects/parallelSDC/preconditioner_playground_MPI.py <https:/

Results:

.. image:: ../data/parallelSDC_preconditioner_MPI_heat.png
.. image:: ../../../data/parallelSDC_preconditioner_MPI_heat.png
:scale: 100 %

.. image:: ../data/parallelSDC_preconditioner_MPI_advection.png
.. image:: ../../../data/parallelSDC_preconditioner_MPI_advection.png
:scale: 100 %

.. image:: ../data/parallelSDC_preconditioner_MPI_vanderpol.png
.. image:: ../../../data/parallelSDC_preconditioner_MPI_vanderpol.png
:scale: 100 %

.. image:: ../data/parallelSDC_preconditioner_MPI_fisher.png
.. image:: ../../../data/parallelSDC_preconditioner_MPI_fisher.png
:scale: 100 %

12 changes: 6 additions & 6 deletions docs/source/projects/doc_solar_system.rst
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Expand Up @@ -4,16 +4,16 @@ Full code: `pySDC/projects/Hamiltonian/solar_system.py <https://github.com/Paral

Results:

.. literalinclude:: ./data/outer_solar_system_out.txt
.. literalinclude:: ../../../data/outer_solar_system_out.txt

.. image:: ../data/outer_solar_system_hamiltonian.png
.. image:: ../../../data/outer_solar_system_hamiltonian.png
:scale: 100 %
.. image:: ../data/outer_solar_system_positions.png
.. image:: ../../../data/outer_solar_system_positions.png
:scale: 100 %

.. literalinclude:: ./data/full_solar_system_out.txt
.. literalinclude:: ../../../data/full_solar_system_out.txt

.. image:: ../data/full_solar_system_hamiltonian.png
.. image:: ../../../data/full_solar_system_hamiltonian.png
:scale: 100 %
.. image:: ../data/full_solar_system_positions.png
.. image:: ../../../data/full_solar_system_positions.png
:scale: 100 %
2 changes: 1 addition & 1 deletion docs/source/tutorial/doc_step_1_A.rst
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Expand Up @@ -4,4 +4,4 @@ Full code: `pySDC/tutorial/step_1/A_spatial_problem_setup.py <https://github.com

Results:

.. literalinclude:: ./data/step_1_A_out.txt
.. literalinclude:: ../../../data/step_1_A_out.txt
4 changes: 2 additions & 2 deletions docs/source/tutorial/doc_step_1_B.rst
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Expand Up @@ -4,7 +4,7 @@ Full code: `pySDC/tutorial/step_1/B_spatial_accuracy_check.py <https://github.co

Results:

.. literalinclude:: ./data/step_1_B_out.txt
.. literalinclude:: ../../../data/step_1_B_out.txt

.. image:: ../data/step_1_accuracy_test_space.png
.. image:: ../../../data/step_1_accuracy_test_space.png
:scale: 50 %
2 changes: 1 addition & 1 deletion docs/source/tutorial/doc_step_1_C.rst
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Expand Up @@ -4,4 +4,4 @@ Full code: `pySDC/tutorial/step_1/C_collocation_problem_setup.py <https://github

Results:

.. literalinclude:: ./data/step_1_C_out.txt
.. literalinclude:: ../../../data/step_1_C_out.txt
4 changes: 2 additions & 2 deletions docs/source/tutorial/doc_step_1_D.rst
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Expand Up @@ -4,7 +4,7 @@ Full code: `pySDC/tutorial/step_1/D_collocation_accuracy_check.py <https://githu

Results:

.. literalinclude:: ./data/step_1_D_out.txt
.. literalinclude:: ../../../data/step_1_D_out.txt

.. image:: ../data/step_1_accuracy_test_coll.png
.. image:: ../../../data/step_1_accuracy_test_coll.png
:scale: 50 %
2 changes: 1 addition & 1 deletion docs/source/tutorial/doc_step_2_A.rst
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Expand Up @@ -4,4 +4,4 @@ Full code: `pySDC/tutorial/step_2/A_step_data_structure.py <https://github.com/P

Results:

.. literalinclude:: ./data/step_2_A_out.txt
.. literalinclude:: ../../../data/step_2_A_out.txt
2 changes: 1 addition & 1 deletion docs/source/tutorial/doc_step_2_B.rst
Original file line number Diff line number Diff line change
Expand Up @@ -4,4 +4,4 @@ Full code: `pySDC/tutorial/step_2/B_my_first_sweeper.py <https://github.com/Para

Results:

.. literalinclude:: ./data/step_2_B_out.txt
.. literalinclude:: ../../../data/step_2_B_out.txt
2 changes: 1 addition & 1 deletion docs/source/tutorial/doc_step_2_C.rst
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Expand Up @@ -4,4 +4,4 @@ Full code: `pySDC/tutorial/step_2/C_using_pySDCs_frontend.py <https://github.com

Results:

.. literalinclude:: ./data/step_2_C_out.txt
.. literalinclude:: ../../../data/step_2_C_out.txt
2 changes: 1 addition & 1 deletion docs/source/tutorial/doc_step_3_A.rst
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Expand Up @@ -4,4 +4,4 @@ Full code: `pySDC/tutorial/step_3/A_getting_statistics.py <https://github.com/Pa

Results:

.. literalinclude:: ./data/step_3_A_out.txt
.. literalinclude:: ../../../data/step_3_A_out.txt
2 changes: 1 addition & 1 deletion docs/source/tutorial/doc_step_3_B.rst
Original file line number Diff line number Diff line change
Expand Up @@ -4,4 +4,4 @@ Full code: `pySDC/tutorial/step_3/B_adding_statistics.py <https://github.com/Par

Results:

.. literalinclude:: ./data/step_3_B_out.txt
.. literalinclude:: ../../../data/step_3_B_out.txt
2 changes: 1 addition & 1 deletion docs/source/tutorial/doc_step_3_C.rst
Original file line number Diff line number Diff line change
Expand Up @@ -4,4 +4,4 @@ Full code: `pySDC/tutorial/step_3/C_study_collocations.py <https://github.com/Pa

Results:

.. literalinclude:: ./data/step_3_C_out.txt
.. literalinclude:: ../../../data/step_3_C_out.txt
2 changes: 1 addition & 1 deletion docs/source/tutorial/doc_step_4_A.rst
Original file line number Diff line number Diff line change
Expand Up @@ -4,4 +4,4 @@ Full code: `pySDC/tutorial/step_4/A_spatial_transfer_operators.py <https://githu

Results:

.. literalinclude:: ./data/step_4_A_out.txt
.. literalinclude:: ../../../data/step_4_A_out.txt
2 changes: 1 addition & 1 deletion docs/source/tutorial/doc_step_4_B.rst
Original file line number Diff line number Diff line change
Expand Up @@ -4,4 +4,4 @@ Full code: `pySDC/tutorial/step_4/B_multilevel_hierarchy.py <https://github.com/

Results:

.. literalinclude:: ./data/step_4_B_out.txt
.. literalinclude:: ../../../data/step_4_B_out.txt
2 changes: 1 addition & 1 deletion docs/source/tutorial/doc_step_4_C.rst
Original file line number Diff line number Diff line change
Expand Up @@ -4,4 +4,4 @@ Full code: `pySDC/tutorial/step_4/C_SDC_vs_MLSDC.py <https://github.com/Parallel

Results:

.. literalinclude:: ./data/step_4_C_out.txt
.. literalinclude:: ../../../data/step_4_C_out.txt
2 changes: 1 addition & 1 deletion docs/source/tutorial/doc_step_4_D.rst
Original file line number Diff line number Diff line change
Expand Up @@ -4,4 +4,4 @@ Full code: `pySDC/tutorial/step_4/D_MLSDC_with_particles.py <https://github.com/

Results:

.. literalinclude:: ./data/step_4_D_out.txt
.. literalinclude:: ../../../data/step_4_D_out.txt
2 changes: 1 addition & 1 deletion docs/source/tutorial/doc_step_5_A.rst
Original file line number Diff line number Diff line change
Expand Up @@ -4,4 +4,4 @@ Full code: `pySDC/tutorial/step_5/A_multistep_multilevel_hierarchy.py <https://g

Results:

.. literalinclude:: ./data/step_5_A_out.txt
.. literalinclude:: ../../../data/step_5_A_out.txt
2 changes: 1 addition & 1 deletion docs/source/tutorial/doc_step_5_B.rst
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Expand Up @@ -4,4 +4,4 @@ Full code: `pySDC/tutorial/step_5/B_my_first_PFASST_run.py <https://github.com/P

Results:

.. literalinclude:: ./data/step_5_B_out.txt
.. literalinclude:: ../../../data/step_5_B_out.txt
2 changes: 1 addition & 1 deletion docs/source/tutorial/doc_step_5_C.rst
Original file line number Diff line number Diff line change
Expand Up @@ -4,4 +4,4 @@ Full code: `pySDC/tutorial/step_5/C_advection_and_PFASST.py <https://github.com/

Results:

.. literalinclude:: ./data/step_5_C_out.txt
.. literalinclude:: ../../../data/step_5_C_out.txt
4 changes: 2 additions & 2 deletions docs/source/tutorial/doc_step_6_A.rst
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Expand Up @@ -4,5 +4,5 @@ Full code: `pySDC/tutorial/step_6/A_run_non_MPI_controller.py <https://github.co

Results:

.. literalinclude:: ./data/step_6_A_sl_out.txt
.. literalinclude:: ./data/step_6_A_ml_out.txt
.. literalinclude:: ../../../data/step_6_A_sl_out.txt
.. literalinclude:: ../../../data/step_6_A_ml_out.txt
2 changes: 1 addition & 1 deletion docs/source/tutorial/doc_step_6_B.rst
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Expand Up @@ -4,4 +4,4 @@ Full code: `pySDC/tutorial/step_6/B_odd_temporal_distribution.py <https://github

Results:

.. literalinclude:: ./data/step_6_B_out.txt
.. literalinclude:: ../../../data/step_6_B_out.txt
4 changes: 2 additions & 2 deletions docs/source/tutorial/doc_step_6_C.rst
Original file line number Diff line number Diff line change
Expand Up @@ -6,5 +6,5 @@ Full code: `pySDC/tutorial/step_6/C_MPI_parallelization.py <https://github.com/P

Results:

.. literalinclude:: ./data/step_6_C1_out.txt
.. literalinclude:: ./data/step_6_C2_out.txt
.. literalinclude:: ../../../data/step_6_C1_out.txt
.. literalinclude:: ../../../data/step_6_C2_out.txt
2 changes: 1 addition & 1 deletion docs/source/tutorial/doc_step_7_A.rst
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Expand Up @@ -4,4 +4,4 @@ Full code: `pySDC/tutorial/step_7/A_pySDC_with_FEniCS.py <https://github.com/Par

Results:

.. literalinclude:: ./data/step_7_A_out.txt
.. literalinclude:: ../../../data/step_7_A_out.txt
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