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Lee, please take a look at my changes. Major changes include:
The following warnings remain to be fixed:
`Generating cluster analysis...
/home/syouse3/.local/lib/python2.7/site-packages/matplotlib/axes/_base.py:2809: UserWarning: Attempting to set identical bottom==top results
in singular transformations; automatically expanding.
bottom=-0.5, top=-0.5
'bottom=%s, top=%s') % (bottom, top))
Generating Kaplan-Meier plots...
Saving figures...
/home/syouse3/.local/lib/python2.7/site-packages/matplotlib/collections.py:590: FutureWarning: elementwise comparison failed; returning scalar instead, but in the future will perform elementwise comparison
if self._edgecolors == str('face'):
/home/syouse3/.local/lib/python2.7/site-packages/matplotlib/axis.py:1024: UserWarning: Unable to find pixel distance along axis for interval padding of ticks; assuming no interval padding needed.
needed.")
/home/syouse3/.local/lib/python2.7/site-packages/matplotlib/axis.py:1034: UserWarning: Unable to find pixel distance along axis for interval padding of ticks; assuming no interval padding needed.
needed.")
`