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cytation5: movement over well, coverage, _auto_focus_search_range #406

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Merged
merged 16 commits into from
Mar 4, 2025
Merged

cytation5: movement over well, coverage, _auto_focus_search_range #406

merged 16 commits into from
Mar 4, 2025

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@rickwierenga
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@rickwierenga rickwierenga commented Feb 24, 2025

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rickwierenga commented Mar 3, 2025

changes:

  • shake frequency
  • objectives
    • 4x pl fl phase
    • 20x pl fl phase
    • 40x pl fl phase
  • movement over well
  • coverage option ("full" or (row, col) tuple)
  • all imaging modes:
    • C377_647
    • C400_647
    • C469_593
    • ACRIDINE_ORANGE
    • CFP
    • CFP_FRET_V2
    • CFP_YFP_FRET
    • CFP_YFP_FRET_V2
    • CHLOROPHYLL_A
    • CY5
    • CY5_5
    • CY7
    • DAPI
    • GFP
    • GFP_CY5
    • OXIDIZED_ROGFP2
    • PROPOIDIUM_IODIDE
    • RFP
    • RFP_CY5
    • TAG_BFP
    • TEXAS_RED
    • YFP
  • .open(slow=True), .close(slow=True)
  • automated loading of configured filters / objectives
  • support lidded plates
  • led_intensity parameter on capture

@rickwierenga rickwierenga merged commit c4a34a9 into main Mar 4, 2025
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@rickwierenga rickwierenga deleted the more-cytation5 branch March 4, 2025 21:42
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@rickwierenga