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This wiki serves as the Wright Lab's introduction and reference for wet and dry lab protocols and tips. View the links below and check the sidebar for useful info.

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Computing

• Read the Rules and Regulations page
• Using the servers: grandiflora, capsicum, ohta, and gustave info
• Git resources: How to use git & GitHub
• Code styleguides: Make sure your code is easy to read and understand

Bioinformatic tools and pipelines

• Samtools, Picard, and GATK variant calling pipeline
• Aging LTR insertions

older tools - please consult more recent documentation before using

• Running barraCUDA- use bwa-mem2 instead
• Running hapCUT to obtain putative haplotype blocks

Lab Protocols

• Wetlab protocols: safety first! Make sure your WHMIS/EHS training is up-to-date
• Qiagen kit Rumex DNA extraction
• Sorbitol-CTAB Rumex DNA extraction

Facilities Information and Contacts

• ESC
• Growth facilities
• Lab
• EEB department

Lab calendar

Where's Stephen? Calendar