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Summary

This PR fixes segmentation faults that occur when using Krylov iterative linear solvers with SUNDIALS v7.4 on macOS.

Problem

The Julia wrappers for SUNDIALS Krylov solvers were missing the required SUNContext parameter introduced in SUNDIALS 6.0+. This caused immediate segmentation faults on macOS when attempting to use GMRES, FGMRES, BCG, PCG, or TFQMR linear solvers with KINSOL, CVODE, or IDA.

Solution

  • Added the missing SUNContext parameter to all Krylov solver constructor calls
  • Updated the C library wrapper definitions to properly pass the context through to SUNDIALS

Changes Made

Files Modified:

  1. src/simple.jl - Added ctx parameter to all Krylov solver constructors in KINSOL interface
  2. src/common_interface/solve.jl - Added ctx parameter for CVODE, CVODES, and IDA Krylov solver calls
  3. lib/libsundials_api.jl - Fixed ccall signatures to include SUNContext parameter

Affected Solvers:

  • SUNLinSol_SPGMR (GMRES)
  • SUNLinSol_SPFGMR (FGMRES)
  • SUNLinSol_SPBCGS (BCG)
  • SUNLinSol_PCG (PCG)
  • SUNLinSol_SPTFQMR (TFQMR)

Testing

Tested on macOS (Darwin 24.6.0, Apple Silicon) with SUNDIALS v7.4.1:

✅ All 5 Krylov solvers now work with KINSOL
✅ All 5 Krylov solvers now work with CVODE
✅ All 5 Krylov solvers now work with IDA
✅ No more segmentation faults

Test script confirming all solvers work:

# All tests pass - 15 PASSED, 0 FAILED
# GMRES, FGMRES, BCG, PCG, TFQMR all work with CVODE, KINSOL, and IDA

Impact

This fix is critical for macOS users as it resolves crashes when using any Krylov iterative solver. The changes are backward compatible and follow the SUNDIALS 7.x API requirements.

Fixes segmentation faults reported when running test suite on macOS with SUNDIALS v7.4.

🤖 Generated with Claude Code

Add missing SUNContext parameter to Krylov iterative linear solver constructors.
SUNDIALS 7.x requires a SUNContext parameter for thread safety, but the Julia
wrappers were calling these functions with only 3 parameters, causing immediate
segmentation faults on macOS.

Affected solvers:
- SUNLinSol_SPGMR (GMRES)
- SUNLinSol_SPFGMR (FGMRES)
- SUNLinSol_SPBCGS (BCG)
- SUNLinSol_PCG (PCG)
- SUNLinSol_SPTFQMR (TFQMR)

Changes:
- Update all Krylov solver calls in src/simple.jl to pass ctx parameter
- Update all Krylov solver calls in src/common_interface/solve.jl for CVODE, CVODES, IDA
- Fix library wrapper definitions in lib/libsundials_api.jl to include SUNContext in ccall

This resolves segmentation faults when using Krylov solvers with KINSOL, CVODE, and IDA
on macOS with SUNDIALS v7.4.

🤖 Generated with [Claude Code](https://claude.ai/code)

Co-Authored-By: Claude <noreply@anthropic.com>
@ChrisRackauckas ChrisRackauckas merged commit 72b1b89 into master Sep 1, 2025
4 of 6 checks passed
@ChrisRackauckas ChrisRackauckas deleted the fix-sundials-74-krylov-segfault branch September 1, 2025 18:01
@ChrisRackauckas
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@ViralBShah Mac should be fine now. Not sure how other tests worked without it 😅 but the memory context is local now on those.

@ViralBShah
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ViralBShah commented Sep 2, 2025

Still failing on mac. I have been using Julia 1.11.6 (but fails on 1.10 and 1.12 as well):

WARNING: Method definition f_oop(Any, Any) in module Main at /Users/viral/.julia/dev/Sundials/test/kinsol_banded.jl:22 overwritten at /Users/viral/.julia/dev/Sundials/test/kinsol_nonlinear_solve.jl:38.
Test Summary: | Pass  Total  Time
Kinsol        |  131    131  2.7s

[11518] signal 11 (2): Segmentation fault: 11
in expression starting at /Users/viral/.julia/dev/Sundials/test/handle_tests.jl:39
SUNSparseMatrix at /Users/viral/.julia/artifacts/a67d3539b46859461a015e756e14f4707979c8dd/lib/libsundials_sunmatrixsparse.5.4.0.dylib (unknown line)
SUNSparseMatrix at /Users/viral/.julia/dev/Sundials/lib/libsundials_api.jl:8858
unknown function (ip: 0x136fdc157)
jl_apply at /Users/julia/.julia/scratchspaces/a66863c6-20e8-4ff4-8a62-49f30b1f605e/agent-cache/default-honeycrisp-R17H3W25T9.0/build/default-honeycrisp-R17H3W25T9-0/julialang/julia-release-1-dot-11/src/./julia.h:2157 [inlined]
do_call at /Users/julia/.julia/scratchspaces/a66863c6-20e8-4ff4-8a62-49f30b1f605e/agent-cache/default-honeycrisp-R17H3W25T9.0/build/default-honeycrisp-R17H3W25T9-0/julialang/julia-release-1-dot-11/src/interpreter.c:126

@ViralBShah
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ViralBShah commented Sep 2, 2025

Minimal reproducer:

julia> using Sundials, Test

julia> Sundials.SUNSparseMatrix(3, 3, 3, Sundials.CSC_MAT)

[15022] signal 11 (2): Segmentation fault: 11
in expression starting at REPL[2]:1
SUNSparseMatrix at /Users/viral/.julia/artifacts/a67d3539b46859461a015e756e14f4707979c8dd/lib/libsundials_sunmatrixsparse.5.4.0.dylib (unknown line)
SUNSparseMatrix at /Users/viral/.julia/dev/Sundials/lib/libsundials_api.jl:8858
unknown function (ip: 0x1265d4157)

@ChrisRackauckas
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Tests on mac pass on my computer, and pass in #489

@ViralBShah
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ViralBShah commented Sep 2, 2025

The SUNSparseMatrix constructors are missing the Suncontext in the sundials_api.

I don't quite understand why it is working on linux and CI, but it is probably getting lucky with some default code paths. I am able to consistently crash with that one liner on my mac.

@ChrisRackauckas
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It is interesting that it doesn't consistently segfault, but it can if the context is missing. This new SunContext is pretty silly.

@ViralBShah
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Since we are calling it with fewer arguments, it is either somehow getting a context luckily or NULL is acceptable or something else that is acceptable is getting picked up.

ChrisRackauckas-Claude pushed a commit to ChrisRackauckas-Claude/Sundials.jl that referenced this pull request Sep 2, 2025
…UNContext parameter

## Problem
SUNSparseMatrix constructors were missing the required SUNContext parameter in their ccall,
causing segmentation faults on macOS when using functions like:
- Sundials.SUNSparseMatrix(3, 3, 3, Sundials.CSC_MAT)

## Root Cause
The underlying SUNDIALS 7.x library requires a SUNContext parameter for SUNSparseMatrix
constructors, but the Julia wrapper was:
1. Missing SUNContext in the ccall signature
2. Not creating a proper context for non-context versions
3. Had incorrect comments claiming SUNSparseMatrix doesn't need context

## Solution
- Updated primary constructor to include SUNContext parameter in ccall
- Modified non-context version to create and use a proper SUNContext
- Fixed wrapper functions to properly pass context parameter
- Removed incorrect comments and duplicate function definitions

## Testing
- Verified SUNSparseMatrix(3, 3, 3, Sundials.CSC_MAT) no longer segfaults
- Confirmed test suite handle_tests.jl now passes
- Maintains backward compatibility for existing code

Fixes segmentation fault reported in SciML#488 (comment)

🤖 Generated with [Claude Code](https://claude.ai/code)

Co-Authored-By: Claude <noreply@anthropic.com>
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