SynBioHub is avalible through two projects:
- An open source software project providing a web interface for the storing and publishing of synthetic biology designs.
- A public instance of the aforementioned software project at synbiohub.org, allowing users to upload and share designs.
SynBioHub is the best way to publish a library of synthetic parts and designs. As a service it is used, to share designs with collaborators, and to store designs of biological systems locally. Data in SynBioHub can be accessed via the HTTP API, Java API, or Python API where it can then be integrated into CAD tools for building genetic designs. SynBioHub contains an interface for users to upload new biological data to the database, to visualize DNA parts, to perform queries to access desired parts, and to download SBOL, GenBank, FASTA, etc.
- McLaughlin, James Alastair, et al. "SynBioHub: a standards-enabled design repository for synthetic biology." ACS synthetic biology 7.2 (2018): 682-688.
- Mante, Jeanet, Zach Zundel, and Chris J. Myers. "Extending SynBioHub's Functionality with Plugins." ACS Synthetic Biology (2020).
- Zhang, Michael, Zach Zundel, and Chris J. Myers. "SBOLExplorer: Data Infrastructure and Data Mining for Genetic Design Repositories." ACS synthetic biology 8.10 (2019): 2287-2294.
- Dr. James Alastair McLaughlin (Newcastle University)
- Prof. Chris J. Myers (University of Utah)
- Dr. Goksel Misirli (Newcastle University)
- Prof. Anil Wipat (Newcastle University)
- Zach Zundel (University of Utah)
- James Scholz (University of Utah)
An earlier version of SynBioHub known as SBOL Stack was developed by the following people:
- Dr. Curtis Madsen (Boston University)
- Dr. James Alastair McLaughlin (Newcastle University)
- Dr. Goksel Misirli (Newcastle University)
- Dr. Matthew Pocock (Turing Ate My Hamster Ltd.)
- Dr. Keith Flanagan (Newcastle University)
- Dr. Jennifer Hallinan (Macquarie University)
- Prof. Anil Wipat (Newcastle University)
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