842 configurationyaml configurator gui

[AdvancedImagingUTSW]

This is a partial PR. I didn't want it to get too big...

• New command line argument provided: -c --configurator to launch the configuration assistant.
• configurator.py is the controller.
• configurator_application_window.py is the view.
• User can specify the number of microscopes they would like in their configuration.
• User selects each device type, which is pulled from the __init__.py file.

TODO:

• Still needs a user entry for them to name each microscope.
• Currently, if they change the number of microscopes midway through the configuration, It think it will delete everything. Need a better way. For example, if they specify 2 microscopes, do a partial configuration, then specify 3, it should keep the original 2 not delete them.
• Add two columns to the device window after they select the device type. One will be for required parameters, and the other will be for optional parameters.
• No logic for creating YAML yet provided.

[codecov]

Codecov Report

Attention: Patch coverage is 8.99654% with 526 lines in your changes are missing coverage. Please review.

Project coverage is 51.06%. Comparing base (488d2b4) to head (b4e7257).
Report is 18 commits behind head on develop.

Files	Patch %	Lines
...c/navigate/view/configurator_application_window.py	0.00%	239 Missing ⚠️
src/navigate/controller/configurator.py	0.00%	222 Missing ⚠️
src/navigate/config/configuration_database.py	0.00%	29 Missing ⚠️
...c/navigate/view/custom_widgets/CollapsibleFrame.py	0.00%	22 Missing ⚠️
src/navigate/main.py	0.00%	6 Missing ⚠️
src/navigate/config/config.py	86.84%	5 Missing ⚠️
src/navigate/tools/main_functions.py	25.00%	3 Missing ⚠️

Additional details and impacted files

@@             Coverage Diff             @@
##           develop     #848      +/-   ##
===========================================
- Coverage    52.53%   51.06%   -1.47%     
===========================================
  Files          164      178      +14     
  Lines        18455    19026     +571     
===========================================
+ Hits          9695     9716      +21     
- Misses        8760     9310     +550     

Flag	Coverage Δ
unittests	51.06% <8.99%> (-1.47%)	⬇️

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[annie-xd-wang]

Do not test it now. The functions for generating configurations for microscopes are now working. They do not generate the hardware header section. I believe we should remove the header section so that the configuration does not contain redundant information. I will update the device_startup_functions later to not use the hardware header information.