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Ultima Flow Render Changes, Part 2
Goto mate added
Goto Supplemental Alignment
Ultima style version build
Alt Flow Del Render
del quality fix
tp direction fix
T0 priority
add T0 to base info panel
insert annotation fix
INS should simply use base quality
fix INS with len>1 colors
additional rendering changes
findQualByTPValue: symmetric considerations
Del 1.- assume high QV if none known
GARRETY_LOW_PROB_MODE mode
Newer version of INDEL quality marks - not done yet
TP to return maxQ if no exacg match found
additional changes in indel visi
getQualityFromTP to return highest q value from read if no tp matches
hmer indels must span whole gap/block
protect against files with no read group
missing QV values on inserts brought back
non-central quality should be doubled when displayed