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This PR cleans up two inter-related things: logging and the creation of the Click "group" object.
It provides a Python decorator for creating the Click
cli
function so that everywirecell-*
command gets common command line options (for logging and help). It applies this to all the current__main__.py
.With this in place, all
__main__.py
and module code may use, eg,log.debug()
instead ofprint()
. This PR replacesprint()
withlog
methods in the__main__.py
but there are still manyprint()
sprinkled in the modules.It also moves the some other Click-related decorators from
plots.cli
toutil.cli
and applies them to a few new commands.Breaking: These new applications do change the command line option flags for some of the sub-commands. I figure having standardized calling patterns is worth the breakage. It's why I make this a PR instead of just pushing.
There are still more functions with nearly common option patterns and it would be good to further standardize. But, first let's see what problems (if any) this breaking change causes.