Skip to content

ashishakkumar/bioinformatics_file

BranchesTags

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

24 Commits
FastQC
FastQC
 
 
bbio
bbio
 
 
bbmap
bbmap
 
 
bowtie2-2.4.2-linux-x86_64
bowtie2-2.4.2-linux-x86_64
 
 
results_FastQC
results_FastQC
 
 
yeast_ref_genome
yeast_ref_genome
 
 
.D12_17539_ATCTCA_read.swp
.D12_17539_ATCTCA_read.swp
 
 
.gitattributes
.gitattributes
 
 
06ea9527-6fe0-4ad4-a98d-16106082220e.png
06ea9527-6fe0-4ad4-a98d-16106082220e.png
 
 
29TH_mARCH_SEQ.meg
29TH_mARCH_SEQ.meg
 
 
29TH_mARCH_SEQ.mtsx
29TH_mARCH_SEQ.mtsx
 
 
29TH_march_seq.txt
29TH_march_seq.txt
 
 
29th_MARCH_SEQUENCE.txt
29th_MARCH_SEQUENCE.txt
 
 
29th_march_seq_with_outlook.mdsx
29th_march_seq_with_outlook.mdsx
 
 
29th_march_seq_with_outlook.meg
29th_march_seq_with_outlook.meg
 
 
39d6e2cb-9140-4eb3-baf6-ec683a548044.png
39d6e2cb-9140-4eb3-baf6-ec683a548044.png
 
 
5c536b7a-803f-45b4-8888-ed666603f049.png
5c536b7a-803f-45b4-8888-ed666603f049.png
 
 
Assignment 01 March 2023-Autocorrelation (2).xls
Assignment 01 March 2023-Autocorrelation (2).xls
 
 
Assignment 15 March 2023-Heteroscedasticity.xls
Assignment 15 March 2023-Heteroscedasticity.xls
 
 
BBMap_38.37.tar.gz
BBMap_38.37.tar.gz
 
 
BBduk1.sh
BBduk1.sh
 
 
D12_17539_ATCTCA_read1_part.fastq
D12_17539_ATCTCA_read1_part.fastq
 
 
D12_17539_ATCTCA_read1_part_fastqc.html
D12_17539_ATCTCA_read1_part_fastqc.html
 
 
D12_17539_ATCTCA_read2_part.fastq
D12_17539_ATCTCA_read2_part.fastq
 
 
Excel
Excel
 
 
First_50_genes.pdf
First_50_genes.pdf
 
 
Heteroscedasticity Test.pdf
Heteroscedasticity Test.pdf
 
 
Heteroscedasticity.pdf
Heteroscedasticity.pdf
 
 
Iter1_read1_trimmed.fastq
Iter1_read1_trimmed.fastq
 
 
Iter1_read1_trimmed_fastqc.html
Iter1_read1_trimmed_fastqc.html
 
 
Iter1_read2_trimmed.fastq
Iter1_read2_trimmed.fastq
 
 
Iter1_read2_trimmed_fastqc.html
Iter1_read2_trimmed_fastqc.html
 
 
Mapping_out.sam
Mapping_out.sam
 
 
Plot_RNAseq_results.txt
Plot_RNAseq_results.txt
 
 
README.md
README.md
 
 
Rplot.pdf
Rplot.pdf
 
 
Sample_hist.pdf
Sample_hist.pdf
 
 
Spreadsheet(29 th March)
Spreadsheet(29 th March)
 
 
Test.txt
Test.txt
 
 
Volcano_T4_vs_T1.pdf
Volcano_T4_vs_T1.pdf
 
 
Yeast_WG.1.bt2
Yeast_WG.1.bt2
 
 
Yeast_WG.2.bt2
Yeast_WG.2.bt2
 
 
Yeast_WG.3.bt2
Yeast_WG.3.bt2
 
 
Yeast_WG.4.bt2
Yeast_WG.4.bt2
 
 
Yeast_WG.rev.1.bt2
Yeast_WG.rev.1.bt2
 
 
Yeast_WG.rev.2.bt2
Yeast_WG.rev.2.bt2
 
 
bcftools-1.14.tar.bz2
bcftools-1.14.tar.bz2
 
 
bowtie2-2.4.2-linux-x86_64.zip
bowtie2-2.4.2-linux-x86_64.zip
 
 
classifier_seq_upload2161605065567529140.FASTAhier.txt
classifier_seq_upload2161605065567529140.FASTAhier.txt
 
 
excel file
excel file
 
 
fasta files
fasta files
 
 
fasta_files.txt.txt
fasta_files.txt.txt
 
 
fastqc_v0.11.9.zip
fastqc_v0.11.9.zip
 
 
megafile.meg
megafile.meg
 
 
query_sequence.txt.txt
query_sequence.txt.txt
 
 
samtools-1.14.tar
samtools-1.14.tar
 
 

Repository files navigation

This repository contains information about FASTA files containing the sequencing and Quality Score (FASTQ) data.

About

No description, website, or topics provided.

Resources

Readme
Activity

Stars

1 star

Watchers

1 watching

Forks

1 fork
Report repository

Releases

No releases published

Packages

No packages published

Languages