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BatchX

BatchX processing that makes sense

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  1. json-schema json-schema Public

    Forked from everit-org/json-schema

    JSON Schema validator for java, based on the org.json API

    Java

  2. megalodon megalodon Public

    Forked from nanoporetech/megalodon

    Megalodon is a research command line tool to extract high accuracy modified base and sequence variant calls from raw nanopore reads by anchoring the information rich basecalling neural network out…

    Python

  3. VariantCallingFJD VariantCallingFJD Public

    Forked from TBLabFJD/VariantCallingFJD

    Perl

  4. RFcaller RFcaller Public

    Forked from anderdnavarro/RFcaller

    A pipeline that uses read-level features and extra trees/random forest algorithms for accurate and fast detection of somatic mutations in next generation sequencing data

    Python

  5. DEGreport DEGreport Public

    Forked from lpantano/DEGreport

    Create a cromphensive report of DEG list coming from any analysis of RNAseq data

    R

  6. lumpy-sv lumpy-sv Public

    Forked from arq5x/lumpy-sv

    lumpy: a general probabilistic framework for structural variant discovery

    C

Repositories

Showing 6 of 6 repositories
  • json-schema Public Forked from everit-org/json-schema

    JSON Schema validator for java, based on the org.json API

    batchx/json-schema’s past year of commit activity
    Java 0 Apache-2.0 283 0 0 Updated Nov 4, 2022
  • lumpy-sv Public Forked from arq5x/lumpy-sv

    lumpy: a general probabilistic framework for structural variant discovery

    batchx/lumpy-sv’s past year of commit activity
    C 0 MIT 118 0 0 Updated Jun 7, 2022
  • DEGreport Public Forked from lpantano/DEGreport

    Create a cromphensive report of DEG list coming from any analysis of RNAseq data

    batchx/DEGreport’s past year of commit activity
    R 0 MIT 16 0 0 Updated May 24, 2022
  • RFcaller Public Forked from anderdnavarro/RFcaller

    A pipeline that uses read-level features and extra trees/random forest algorithms for accurate and fast detection of somatic mutations in next generation sequencing data

    batchx/RFcaller’s past year of commit activity
    Python 0 3 0 0 Updated May 2, 2022
  • batchx/VariantCallingFJD’s past year of commit activity
    Perl 0 6 0 0 Updated Apr 20, 2022
  • megalodon Public Forked from nanoporetech/megalodon

    Megalodon is a research command line tool to extract high accuracy modified base and sequence variant calls from raw nanopore reads by anchoring the information rich basecalling neural network output to a reference genome/transriptome.

    batchx/megalodon’s past year of commit activity
    Python 0 29 0 0 Updated Feb 25, 2021

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