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[CANNOLI-244] Update --terms and other options for Ensembl VEP #251

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merged 3 commits into from
Dec 16, 2020
Merged

[CANNOLI-244] Update --terms and other options for Ensembl VEP #251

merged 3 commits into from
Dec 16, 2020

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heuermh
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@heuermh heuermh commented Jul 4, 2020

Fixes #244

@heuermh heuermh added this to the 0.10.0 milestone Jul 4, 2020
@heuermh heuermh mentioned this pull request Jul 4, 2020
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coveralls commented Jul 5, 2020 •
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Coverage Status

Coverage increased (+11.4%) to 11.396% when pulling e70bc59 on heuermh:issue-244 into 111c645 on bigdatagenomics:master.

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@heuermh heuermh modified the milestones: 0.10.0, 0.11.0 Jul 13, 2020
heuermh referenced this pull request in dmaziec/cannoli Oct 26, 2020
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Vep vcf output format
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@heuermh heuermh changed the title [CANNOLI-244] Sequence ontology (SO) is default for --terms argument [CANNOLI-244] Update --format, --terms and other options for Ensembl VEP Oct 26, 2020
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@heuermh heuermh changed the title [CANNOLI-244] Update --format, --terms and other options for Ensembl VEP [CANNOLI-244] Update --terms and other options for Ensembl VEP Oct 26, 2020
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Test PASSed.
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https://amplab.cs.berkeley.edu/jenkins//job/cannoli-prb/255/
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@heuermh heuermh merged commit e647572 into bigdatagenomics:master Dec 16, 2020
@heuermh heuermh deleted the issue-244 branch December 16, 2020 18:40
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Can not run vep
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