adding back in ReadTransformers and ReadFilters #179
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I added shims to get them to behave the way you'd expect
lbergelson
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May 31, 2017
…ple_read_counting Adds a TargetWalker for those tools that iterate thru targets.
lucidtronix
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Jul 27, 2021
Co-authored-by: ndiamant <ndiamant@broadinstitute.org>
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I've added back in
ReadTransformerandReadFilterI moved the all the default ReadFilters into
ReadFilterinstead of the now redundantReadFiltersThe
ReadFilters now come pre-negated.