Improve VCF header validation #4

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Merged

codefitz merged 2 commits into main from codex/add-tests-for-vcf-header-and-duplicates

Jul 8, 2025

Owner

codefitz commented Jul 8, 2025

Summary

check for ##fileformat and #CHROM headers in validator
verify FORMAT header is present whenever genotype columns exist
detect duplicate sample names
test the new validation rules

Testing

python -m unittest discover tests

https://chatgpt.com/codex/tasks/task_e_686d00045ec48326b66fcb10f0cdd8ea


          Add header checks and unit tests

77685c9

codefitz added the codex label

— with

ChatGPT Codex Connector


          Merge branch 'main' into codex/add-tests-for-vcf-header-and-duplicates

7429d26

codefitz merged commit 3bd2898 into main

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