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fix removing date from _stim.json when converting to BIDS #103

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Merged
merged 2 commits into from
Sep 24, 2020
Merged

fix removing date from _stim.json when converting to BIDS #103

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074ef32
fix removing date from _stim.json
Remi-Gau Sep 24, 2020
d2a91d3
mh fix
Remi-Gau Sep 24, 2020
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4 changes: 4 additions & 0 deletions src/subfun/removeAllDateSuffix.m
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Original file line number Diff line number Diff line change
Expand Up @@ -27,6 +27,10 @@ function removeAllDateSuffix(rawDir, subjName, sesName)
end

% do stim
filenames = file_utils('List', subjectPath, ...
sprintf('^%s.*_task-.*_stim_date-.*json$', subjName));
removeDateSuffix(filenames, subjectPath);

filenames = file_utils('List', subjectPath, ...
sprintf('^%s.*_task-.*_stim_date-.*tsv$', subjName));
compressFiles(filenames, subjectPath);
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4 changes: 4 additions & 0 deletions tests/test_removeDateSuffix.m
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Expand Up @@ -21,6 +21,7 @@ function test_removeDateSuffixBasic()
eventsName = 'test_events_date-202008050730.tsv';
stimName = 'test_stim_date-202008050730.tsv';
stimNameZipped = 'test2_stim_date-202008050730.tsv.gz';
stimJsonName = 'test_stim_date-202008050730.json';

filesToProcess = { ...
boldName
Expand All @@ -30,6 +31,7 @@ function test_removeDateSuffixBasic()
eventsName
stimName
stimNameZipped
stimJsonName
};

% create new files for new tests
Expand All @@ -48,6 +50,7 @@ function test_removeDateSuffixBasic()
expectedEventsName = 'test_events.tsv';
expectedStimName = 'test_stim.tsv';
expectedStimNameZipped = 'test2_stim.tsv.gz';
expectedStimJson = 'test_stim.json';

removeDateSuffix(filenames, outputDir);

Expand All @@ -61,6 +64,7 @@ function test_removeDateSuffixBasic()
assertEqual(exist(fullfile(outputDir, expectedStimNameZipped), 'file'), 2);
assertEqual(exist(fullfile(outputDir, expectedBoldName2), 'file'), 2);
assertEqual(exist(fullfile(outputDir, expectedBoldName), 'file'), 2);
assertEqual(exist(fullfile(outputDir, expectedStimJson), 'file'), 2);

% clean up
delete('*.nii*');
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