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Merged
merged 4 commits into from
Aug 8, 2020
Merged

notebook and binder #75

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b993044
add basic notebooks
Remi-Gau Aug 8, 2020
de03b69
add binder files
Remi-Gau Aug 8, 2020
a2810d4
mh autofix
Remi-Gau Aug 8, 2020
1ef30da
clear output notebooks and add tree to binder
Remi-Gau Aug 8, 2020
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3 changes: 3 additions & 0 deletions .gitignore
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Expand Up @@ -21,6 +21,9 @@ tests/*.tsv*
# exclude report from check_my_code
check_my_code_report.txt

# jupyter notebook checkpoints
.ipynb_checkpoints
*/.ipynb_checkpoints/*



1 change: 1 addition & 0 deletions README.md
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Expand Up @@ -56,6 +56,7 @@ sub-090/ses-003/sub-090_ses-003_task-auditoryTask_run-023_events_date-2020072915

- [Installation](./docs/installation.md)
- [How to use it](./docs/usage.md)
- [Jupyter notebooks](./notebooks/README.md)
- [Functions description](./docs/functions_description.md)

## 3. <a name='Contributing'></a>Contributing
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2 changes: 2 additions & 0 deletions binder/apt.txt
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octave
liboctave-dev
2 changes: 2 additions & 0 deletions binder/environment.yml
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dependencies:
- octave_kernel
4 changes: 4 additions & 0 deletions binder/postBuild
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cd ${HOME}
cd lib/JSONio; mkoctfile --mex jsonread.c jsmn.c -DJSMN_PARENT_LINKS; cd ..
sudo apt-get install tree

11 changes: 11 additions & 0 deletions notebooks/README.md
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# README

1. Make sure that you have Octave installed.
2. If you have Conda/Jupyter/pip installed, go to step 4.
3. Download the [Anaconda Installer](https://www.anaconda.com/products/individual) and install it.
4. Install [Octave kernel](https://pypi.org/project/octave-kernel/):
```
pip install octave_kernel
```
5. Run `jupyter notebook` in your terminal. `Octave` should appear on the list
for creating a new notebook.
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