Add CMake build

CMakeLists.txt

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+cmake_minimum_required(VERSION 3.5)
+project(deepflame LANGUAGES CXX)
+FIND_PACKAGE(MPI REQUIRED)
+# Check valid OpenFOAM
+if(DEFINED ENV{WM_PROJECT_DIR})
+	MESSAGE(STATUS "OpenFOAM: " $ENV{WM_PROJECT_DIR})
+else()
+	message(FATAL_ERROR "OpenFOAM is not sourced")
+endif(DEFINED ENV{WM_PROJECT_DIR})
+set(OpenFOAM_VERSION $ENV{WM_PROJECT_VERSION}) 
+set(OpenFOAM_DIR $ENV{WM_PROJECT_DIR})
+set(OpenFOAM_LIB_DIR $ENV{FOAM_LIBBIN})
+set(OpenFOAM_SRC $ENV{FOAM_SRC})
+
+set(SRC_ORIG ${CMAKE_CURRENT_SOURCE_DIR}/src_orig)
+
+
+FUNCTION(R_SEARCH search_path return_list)
+    FILE(GLOB_RECURSE new_list ${search_path}/*.H)
+    SET(dir_list "")
+    FOREACH(file_path ${new_list})
+        GET_FILENAME_COMPONENT(dir_path ${file_path} PATH)
+        SET(dir_list ${dir_list} ${dir_path})
+    ENDFOREACH()
+    LIST(REMOVE_DUPLICATES dir_list)
+    SET(${return_list} ${dir_list} PARENT_SCOPE)
+ENDFUNCTION(R_SEARCH)
+
+set(DF_ROOT ${CMAKE_CURRENT_SOURCE_DIR})
+set(DF_SRC ${CMAKE_CURRENT_SOURCE_DIR}/src)
+
+set(CMAKE_INSTALL_PREFIX ${DF_ROOT})
+
+#set the options for the shared library
+set(LINK_FLAGS  "-fuse-ld=bfd -Xlinker --add-needed -Xlinker --no-as-needed")
+
+#set the link options
+set(CMAKE_SHARED_LINKER_FLAGS "${LINK_FLAGS}")
+set(CMAKE_EXE_LINKER_FLAGS "${LINK_FLAGS}")
+
+
+SET(CMAKE_C_COMPILER g++)
+set(PATH_LIB_OPENMPI "openmpi-system")  # Foundation version
+set(DEFINITIONS_COMPILE "-std=c++11 -m64 -Dlinux64 -DWM_ARCH_OPTION=64 
+-DWM_DP -DWM_LABEL_SIZE=32 -Wall -Wextra -Wold-style-cast -Wnon-virtual-dtor 
+-Wno-unused-parameter -Wno-invalid-offsetof -Wno-attributes -O3  
+-DNoRepository -ftemplate-depth-100 -std=c++14 
+-Wno-unused-variable -Wno-unused-but-set-variable -Wno-old-style-cast -DOMPI_SKIP_MPICXX  
+-pthread -fPIC")
+
+# Compiling configure
+add_definitions("${DEFINITIONS_COMPILE}")
+
+
+R_SEARCH(${DF_SRC}/dfCombustionModels dfcombustion_inc)
+R_SEARCH(${DF_SRC}/dfCanteraMixture dfcantera_inc)
+R_SEARCH(${DF_SRC}/lagrangian/intermediate dflagrangianinter_inc)
+R_SEARCH(${DF_SRC}/lagrangian/spray dflagrangianspray_inc)
+R_SEARCH(${DF_SRC}/lagrangian/turbulence dflagrangianturb_inc)
+R_SEARCH(${DF_SRC}/dfChemistryModel dfchemistry_inc)
+R_SEARCH(${DF_SRC}/thermophysicalModels/thermophysicalProperties dfthermophysicalprop_inc)
+R_SEARCH(${DF_SRC}/thermophysicalModels/thermophysicalProperties dfthermophysicalprop_inc)
+R_SEARCH(${DF_SRC}/thermophysicalModels/basic dfthermophysicalbasic_inc)
+R_SEARCH(${DF_SRC}/thermophysicalModels/SLGThermo dfthermophysicalslg_inc)
+R_SEARCH(${DF_SRC}/TurbulenceModels dfturbulence_inc)
+R_SEARCH(${DF_SRC}/dynamicMesh dfnewdynamic_inc)
+R_SEARCH(${DF_SRC}/dynamicFvMesh dffvdynamic_inc)
+
+
+# Check valid libcantera
+if(DEFINED ENV{CANTERA_ROOT})
+	MESSAGE(STATUS "libcantera: " $ENV{CANTERA_ROOT})
+  set(CANTERA_ROOT $ENV{CANTERA_ROOT})
+else()
+	message(FATAL_ERROR "libcantera directory is not specified")
+endif(DEFINED ENV{CANTERA_ROOT}) 
+
+
+# Check valid Torch
+#if(DEFINED $ENV{PYTHON_INC_DIR)})
+#	MESSAGE(STATUS "Torch: " $ENV{CANTERA_ROOT})
+#else()
+#	message(FATAL_ERROR "no torch used")
+#endif(DEFINED ENV{PYTHON_INC_DIR}) 
+
+
+
+include_directories(
+                    ${OpenFOAM_SRC}/finiteVolume/lnInclude
+
+                    ${OpenFOAM_SRC}/OSspecific/POSIX/lnInclude
+                    ${OpenFOAM_SRC}/OpenFOAM/lnInclude
+                    )
+
+message(STATUS "dummydir:" ${OpenFOAM_LIB_DIR}/dummy)
+link_directories(${OpenFOAM_LIB_DIR} ${OpenFOAM_LIB_DIR}/dummy )
+
+set(CMAKE_INSTALL_PREFIX ${DF_ROOT})
+
+add_subdirectory(${DF_SRC}/thermophysicalModels/thermophysicalProperties)
+add_subdirectory(${DF_SRC}/thermophysicalModels/basic)
+add_subdirectory(${DF_SRC}/functionObjects/field)
+add_subdirectory(${DF_SRC}/dfCanteraMixture)
+add_subdirectory(${DF_SRC}/thermophysicalModels/SLGThermo)
+add_subdirectory(${DF_SRC}/dfChemistryModel)
+add_subdirectory(${DF_SRC}/TurbulenceModels/compressible)
+add_subdirectory(${DF_SRC}/TurbulenceModels/turbulenceModels)
+add_subdirectory(${DF_SRC}/regionModels/surfaceFilmModels)
+add_subdirectory(${DF_SRC}/lagrangian/turbulence)
+add_subdirectory(${DF_SRC}/lagrangian/spray)
+add_subdirectory(${DF_SRC}/lagrangian/intermediate)
+add_subdirectory(${DF_SRC}/dfCombustionModels)
+add_subdirectory(${DF_SRC}/dynamicMesh)
+add_subdirectory(${DF_SRC}/dynamicFvMesh)
+
+
+# add_subdirectory(${DF_ROOT}/applications/solvers/df0DFoam)
+#add_subdirectory(${DF_ROOT}/applications/solvers/dfLowMachFoam)
+# add_subdirectory(${DF_ROOT}/applications/solvers/dfHighSpeedFoam)
+# add_subdirectory(${DF_ROOT}/applications/solvers/dfSprayFoam)

applications/solvers/df0DFoam/CMakeLists.txt

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+cmake_minimum_required(VERSION 3.5)
+project(df0DFoam LANGUAGES CXX)
+FIND_PACKAGE(MPI REQUIRED)
+
+message(STATUS "MPI include path is " ${MPI_INCLUDE_PATH})
+message(STATUS "MPI libraries " ${MPI_LIBRARIES})
+
+
+# Check valid OpenFOAM
+if(DEFINED ENV{WM_PROJECT_DIR})
+	MESSAGE(STATUS "OpenFOAM: " $ENV{WM_PROJECT_DIR})
+else()
+	message(FATAL_ERROR "OpenFOAM is not sourced")
+endif(DEFINED ENV{WM_PROJECT_DIR})
+set(OpenFOAM_VERSION $ENV{WM_PROJECT_VERSION}) 
+set(OpenFOAM_DIR $ENV{WM_PROJECT_DIR})
+set(OpenFOAM_LIB_DIR $ENV{FOAM_LIBBIN})
+set(OpenFOAM_SRC $ENV{FOAM_SRC})
+
+set(DF_ROOT $ENV{DF_ROOT})
+set(DF_SRC ${DF_ROOT}/src)
+set(SRC_ORIG ${DF_ROOT}/src_orig)
+
+
+FUNCTION(R_SEARCH search_path return_list)
+    FILE(GLOB_RECURSE new_list ${search_path}/*.H)
+    SET(dir_list "")
+    FOREACH(file_path ${new_list})
+        GET_FILENAME_COMPONENT(dir_path ${file_path} PATH)
+        SET(dir_list ${dir_list} ${dir_path})
+    ENDFOREACH()
+    LIST(REMOVE_DUPLICATES dir_list)
+    SET(${return_list} ${dir_list} PARENT_SCOPE)
+ENDFUNCTION(R_SEARCH)
+
+
+
+
+R_SEARCH(${DF_SRC}/dfCombustionModels dfcombustion_inc)
+R_SEARCH(${DF_SRC}/dfCanteraMixture dfcantera_inc)
+R_SEARCH(${DF_SRC}/lagrangian/intermediate dflagrangianinter_inc)
+R_SEARCH(${DF_SRC}/lagrangian/spray dflagrangianspray_inc)
+R_SEARCH(${DF_SRC}/lagrangian/turbulence dflagrangianturb_inc)
+R_SEARCH(${DF_SRC}/dfChemistryModel dfchemistry_inc)
+R_SEARCH(${DF_SRC}/thermophysicalModels/thermophysicalProperties dfthermophysicalprop_inc)
+R_SEARCH(${DF_SRC}/thermophysicalModels/thermophysicalProperties dfthermophysicalprop_inc)
+R_SEARCH(${DF_SRC}/thermophysicalModels/basic dfthermophysicalbasic_inc)
+R_SEARCH(${DF_SRC}/thermophysicalModels/SLGThermo dfthermophysicalslg_inc)
+R_SEARCH(${DF_SRC}/TurbulenceModels dfturbulence_inc)
+R_SEARCH(${DF_SRC}/dynamicMesh dfnewdynamic_inc)
+R_SEARCH(${DF_SRC}/dynamicFvMesh dffvdynamic_inc)
+
+
+# Check valid libcantera
+if(DEFINED ENV{CANTERA_ROOT})
+	MESSAGE(STATUS "libcantera: " $ENV{CANTERA_ROOT})
+  set(CANTERA_ROOT $ENV{CANTERA_ROOT})
+else()
+	message(FATAL_ERROR "libcantera directory is not specified")
+endif(DEFINED ENV{CANTERA_ROOT}) 
+
+
+
+include_directories(
+                    ${OpenFOAM_SRC}/finiteVolume/lnInclude
+
+                    ${OpenFOAM_SRC}/OSspecific/POSIX/lnInclude
+                    ${OpenFOAM_SRC}/OpenFOAM/lnInclude
+                    )
+
+
+link_directories(${OpenFOAM_LIB_DIR} ${OpenFOAM_LIB_DIR}/dummy )
+
+set(CMAKE_INSTALL_PREFIX ${DF_ROOT})
+
+#set the options for the shared library
+set(LINK_FLAGS  "-fuse-ld=bfd -Xlinker --add-needed -Xlinker --no-as-needed")
+
+#set the link options
+set(CMAKE_SHARED_LINKER_FLAGS "${LINK_FLAGS}")
+set(CMAKE_EXE_LINKER_FLAGS "${LINK_FLAGS}")
+
+
+SET(CMAKE_C_COMPILER g++)
+set(PATH_LIB_OPENMPI "openmpi-system")  # Foundation version
+set(DEFINITIONS_COMPILE "-std=c++11 -m64 -Dlinux64 -DWM_ARCH_OPTION=64 
+-DWM_DP -DWM_LABEL_SIZE=32 -Wall -Wextra -Wold-style-cast -Wnon-virtual-dtor 
+-Wno-unused-parameter -Wno-invalid-offsetof -Wno-attributes -O3  
+-DNoRepository -ftemplate-depth-100 -std=c++14 
+-Wno-unused-variable -Wno-unused-but-set-variable -Wno-old-style-cast -DOMPI_SKIP_MPICXX  
+-pthread -fPIC")
+
+
+# Compiling configure
+add_definitions("${DEFINITIONS_COMPILE}")
+
+FIND_PACKAGE(MPI REQUIRED)
+
+include_directories(
+    ${OpenFOAM_SRC}/transportModels/compressible/lnInclude 
+    ${OpenFOAM_SRC}/thermophysicalModels/basic/lnInclude 
+    ${OpenFOAM_SRC}/TurbulenceModels/turbulenceModels/lnInclude 
+    ${OpenFOAM_SRC}/TurbulenceModels/compressible/lnInclude 
+    ${OpenFOAM_SRC}/finiteVolume/cfdTools 
+    ${OpenFOAM_SRC}/finiteVolume/lnInclude 
+    ${OpenFOAM_SRC}/meshTools/lnInclude 
+    ${OpenFOAM_SRC}/sampling/lnInclude 
+    ${OpenFOAM_SRC}/dynamicFvMesh/lnInclude 
+    ${OpenFOAM_SRC}/Pstream/mpi 
+    ${dfcantera_inc}
+    ${dfchemistry_inc}
+    ${dfcombustion_inc}
+    ${CANTERA_ROOT}/include 
+    ${MPI_INCLUDE_PATH}
+    ${PROJECT_SOURCE_DIR}
+)
+
+
+add_executable(${PROJECT_NAME} ${PROJECT_SOURCE_DIR}/df0DFoam.C)
+
+
+if(DEFINED ENV{PYTHON_INC_DIR})
+  add_definitions(-DUSE_PYTORCH)
+  find_package (Python REQUIRED COMPONENTS Interpreter Development)
+  find_package(pybind11)
+  include_directories(
+  ${Python_INCLUDE_DIRS}
+  ${pybind11_INCLUDE_DIR}/pybind11
+  )
+  target_link_libraries(${PROJECT_NAME} ${Python_LIBRARIES})
+  message(STATUS "pybind libraries" ${Python_LIBRARIES})
+endif()
+
+
+target_link_libraries(${PROJECT_NAME} $ENV{FOAM_LIBBIN}/libfiniteVolume.so libmeshTools.so libcompressibleTransportModels.so libturbulenceModels.so libsampling.so libOpenFOAM.so libdynamicFvMesh.so)
+
+target_link_libraries(${PROJECT_NAME} ${CANTERA_ROOT}/lib/libcantera_shared.so.2)
+
+target_link_libraries(${PROJECT_NAME} /home/runze/JX/deepflame-cmake/lib/libdfCanteraMixture.so
+/home/runze/JX/deepflame-cmake/lib/libdfChemistryModel.so
+/home/runze/JX/deepflame-cmake/lib/libdfCanteraMixture.so
+/home/runze/JX/deepflame-cmake/lib/libdfFluidThermophysicalModels.so
+/home/runze/JX/deepflame-cmake/lib/libdfCombustionModels.so
+)
+link_directories(${OpenFOAM_LIB_DIR} ${OpenFOAM_LIB_DIR}/dummy)
+
+
+target_link_libraries(${PROJECT_NAME} 
+$ENV{FOAM_LIBBIN}/openmpi-system/libPstream.so
+${MPI_LIBRARIES}
+)
+
+
+#set_target_properties(${PROJECT_NAME}
+#     PROPERTIES
+#     LINK_OPTIONS "-Xlinker --add-needed -Xlinker --no-as-needed"
+#     )
+
+
+install(TARGETS ${PROJECT_NAME} DESTINATION bin)