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mrgsolve_replace_NMsim

Purpose: use mrgsolve to replace $SIM and vpc with NONMEM/psn

The main motivation is to avoid using NONMEM for any simulation tasks (and associated dataset generation & CSV handling), so that the only NONMEM run you would do is $EST.
You still need to develop mrgsolve model file, but from my experience that effort will pays off quite immediately.

Quick look

See https://genentech.github.io/mrgsolve_replace_NMsim/01_mrgsolve_replace_NMsim.html for output from the RMarkdown template

How to use

You can download this repository from the green Clone or download button on top right.
Once cloned or unarchived the ZIP file, you can double-click "mrgsolve_replace_NMsim.Rproj" to open this repository in RStudio.

The main RMarkdown template file is script/01_mrgsolve_replace_NMsim.Rmd, which should be directly executable once you install all the necessary R packages from CRAN.

Author

This tool was initiated by Kenta Yoshida (yoshida.kenta@gene.com) within Genentech Clinical Pharmacology Department.

License

The source code is distributed under a MIT license. Full description can be found in LICENSE.txt

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