🔧 Fix workflow disabling logic in trial command

[dsyme]

Summary

• Refactored workflow disabling logic to work correctly in clone-repo mode
• Improved directory management when disabling workflows
• Removed unnecessary debug logging

Details

The changes modify the RunWorkflowTrials function to:

• Move workflow disabling logic to a more appropriate location
• Ensure correct directory context when disabling workflows
• Handle directory changes safely with proper error checking
• Remove debug print statements

[Copilot]

Pull Request Overview

This PR fixes a critical bug in the workflow disabling logic for the trial command's clone-repo mode. The workflow disabling operation was previously attempting to work on the remote repository before it was cloned locally, causing it to fail. The fix relocates this logic to execute after the local clone is created and uses proper directory context switching to operate on the local filesystem.

Key changes:

• Relocated workflow disabling logic from Step 2.7 (after remote content cloning) to Step 3.5 (after local host repository cloning)
• Implemented safe directory context switching to work on the local clone instead of attempting remote API operations
• Removed unnecessary debug logging statement in determineAndAddEngineSecret function

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