This contains all code used for my Masters thesis. See explanation of folders below.
Contains the labels for all atlases used in this study. Contains information about which nodes are grouped into specific networks.
Contains code to obtain XCP_D output in custom atlases outside of XCP pipeline (e.g., Brainnetome, Power)
Contains code adapted from Brain Connectivity Toolbox. Adapted code loops through subjects to obtain graph theory metrics. Brain Connectivity Toolbox website linked below: https://sites.google.com/site/bctnet
This contains R Studio code used to obtain reliability using ICC(3,1).