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Releases: ismaRP/PPbenchmark

v2.0.0

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@ismaRP ismaRP released this 18 Sep 13:31

Release for Palaeoproteomics benchmarking paper
New version of the analysis.

It adds:

  • Visualization of BLG properties: B-factors, amyloidogenicity, isoelectric point and relative solvent accessibility
  • Comparing PSMs and peptides from different software
  • Replace Venn Diagrams by UpSet plots on PSMs
  • Separate DB search results processing from plotting notebook

Release for Palaeoproteomics benchmarking paper

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@ismaRP ismaRP released this 11 Dec 18:14

"Benchmarking the identification of a single degraded protein to explore optimal search strategies for ancient protein".

  • process_results.ipynb
  • map_denovo.ipynb
  • plot_positions.md