make system directory configurable

[jdx]

Fixes #1064

[github-actions]

🦙 MegaLinter status: ✅ SUCCESS

Descriptor	Linter	Files	Fixed	Errors	Elapsed time
✅ ACTION	actionlint	5		0	0.13s
✅ BASH	bash-exec	20		0	0.06s
✅ BASH	shellcheck	20		0	0.47s
✅ BASH	shfmt	20	0	0	0.05s
✅ DOCKERFILE	hadolint	7		0	0.27s
✅ EDITORCONFIG	editorconfig-checker	454		0	0.49s
✅ JSON	eslint-plugin-jsonc	7	0	0	1.01s
✅ JSON	jsonlint	6		0	0.12s
✅ JSON	prettier	7	0	0	0.63s
✅ JSON	v8r	7		0	4.1s
✅ MARKDOWN	markdownlint	13	0	0	2.86s
✅ MARKDOWN	markdown-link-check	13		0	16.16s
✅ MARKDOWN	markdown-table-formatter	13	0	0	0.4s
✅ PYTHON	bandit	1		0	0.76s
✅ PYTHON	black	1	0	0	0.78s
✅ PYTHON	flake8	1		0	0.28s
✅ PYTHON	isort	1	0	0	0.29s
✅ PYTHON	mypy	1		0	1.95s
✅ PYTHON	pylint	1		0	1.27s
✅ PYTHON	pyright	1		0	5.57s
✅ PYTHON	ruff	1	0	0	0.05s
✅ REPOSITORY	dustilock	yes		no	0.01s
✅ REPOSITORY	gitleaks	yes		no	2.09s
✅ REPOSITORY	git_diff	yes		no	0.03s
✅ REPOSITORY	secretlint	yes		no	2.29s
✅ REPOSITORY	syft	yes		no	0.58s
✅ REPOSITORY	trivy-sbom	yes		no	0.97s
✅ REPOSITORY	trufflehog	yes		no	4.99s
✅ RUBY	rubocop	2	0	0	5.33s
✅ RUST	clippy	yes		no	104.88s
✅ XML	xmllint	5	0	0	0.04s
✅ YAML	prettier	13	0	0	1.35s
✅ YAML	v8r	13		0	11.4s
✅ YAML	yamllint	13		0	0.32s

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