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PPanGGOLiN 2.3.1

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@JeanMainguy JeanMainguy released this 12 Aug 07:56
· 49 commits to master since this release
2.3.1
5492c4c
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Minor Changes

  • Export to graph-tools GT Format: PPanGGOLiN can now export pangenome graphs to the gt format used by graph-tools. By @samuelortion in #380

Bug Fixes

  • Fixed an IndexError that could occur when parsing MMseqs2 alignment TSV files containing empty lines. By @jpjarnoux in #374
  • Fixed a rounding issue during NEM initialization and improved the associated logging messages. Should fix #371. By @JeanMainguy in #372
  • Fixed handling of translation table types to ensure they are correctly processed. By @JeanMainguy in #381
  • Fixed the CI configuration to ensure that the conda environment is correctly used on macOS runners. By @JeanMainguy in #378
  • Fixed the workflow used to check the installation of PPanGGOLiN from Bioconda. By @JeanMainguy in #377

Documentation

  • Fixed and improved various parts of the PPanGGOLiN documentation. By @rsiminel in #379

New Contributors

  • A big thank you to @rsiminel for making his first contribution in #379! 🎉

Full Changelog: 2.3.0...2.3.1

Contributors

JeanMainguy, samuelortion, and 2 other contributors
Assets 2
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