SPH R Programming Course

Acknowledgements

This course was delivered Winter Quarter 2021 for students of OHSU/PSU School of Public Health.

This course is a remix of the R-Bootcamp by Ted Laderas and Jessica Minnier: http://r-bootcamp.netlify.com and the FredHutch.io Intro to R course: https://github.com/fredhutchio/R_intro

Content has been edited and remixed by Ted Laderas and Aaron Coyner.

Tidyverse Illustrations gratefully used from Allison Horst and Garrick Aden-Buie. Thank you so much!

https://github.com/allisonhorst/stats-illustrations https://github.com/gadenbuie/tidyexplain

Resources

• Each class' materials are described in the R markdown (.Rmd) and markdown (.md) files. The former should be edited to make changes to the material; the latter are automatically formatted to appear in GitHub. The directories for each class are also created for publishing on GitHub.
• 0dataset.R includes code used to derive the original data from the National Cancer Institute's Genomic Data Commons. extra/ holds the original data files used for download during the activities, as well as the intermediate data files for each cancer type directly downloaded from NCI-GDC