Releases · LIA-Genomics/vareffect · GitHub

17 Jun 14:41

kangphi

SV Support / Bugfixes / CLI annotate performance Latest

Latest

What's Changed

fix: read full BGZF .vcf.gz with MultiGzDecoder (GzDecoder stopped af… by @kangphi in #6
fix(cli): default --threads to all cores, strip CRLF, finalize gzip o… by @kangphi in #7
Cli vcf performance improvements by @kangphi in #8
Add structural-variant support (INV/BND/INS) to vareffect; bump 0.3.0. by @kangphi in #5

Full Changelog: v0.2.1...v0.3.0

What's Changed

fix: read full BGZF .vcf.gz with MultiGzDecoder (GzDecoder stopped af… by @kangphi in #6
fix(cli): default --threads to all cores, strip CRLF, finalize gzip o… by @kangphi in #7
Cli vcf performance improvements by @kangphi in #8
Add structural-variant support (INV/BND/INS) to vareffect; bump 0.3.0. by @kangphi in #5

Full Changelog: v0.2.1...v0.3.0

What's Changed

fix: read full BGZF .vcf.gz with MultiGzDecoder (GzDecoder stopped af… by @kangphi in #6
fix(cli): default --threads to all cores, strip CRLF, finalize gzip o… by @kangphi in #7
Cli vcf performance improvements by @kangphi in #8
Add structural-variant support (INV/BND/INS) to vareffect; bump 0.3.0. by @kangphi in #5

Full Changelog: v0.2.1...v0.3.0

What's Changed

fix: read full BGZF .vcf.gz with MultiGzDecoder (GzDecoder stopped af… by @kangphi in #6
fix(cli): default --threads to all cores, strip CRLF, finalize gzip o… by @kangphi in #7
Cli vcf performance improvements by @kangphi in #8
Add structural-variant support (INV/BND/INS) to vareffect; bump 0.3.0. by @kangphi in #5

Full Changelog: v0.2.1...v0.3.0

What's Changed

fix: read full BGZF .vcf.gz with MultiGzDecoder (GzDecoder stopped af… by @kangphi in #6
fix(cli): default --threads to all cores, strip CRLF, finalize gzip o… by @kangphi in #7
Cli vcf performance improvements by @kangphi in #8
Add structural-variant support (INV/BND/INS) to vareffect; bump 0.3.0. by @kangphi in #5

Full Changelog: v0.2.1...v0.3.0

What's Changed

fix: read full BGZF .vcf.gz with MultiGzDecoder (GzDecoder stopped af… by @kangphi in #6
fix(cli): default --threads to all cores, strip CRLF, finalize gzip o… by @kangphi in #7
Cli vcf performance improvements by @kangphi in #8
Add structural-variant support (INV/BND/INS) to vareffect; bump 0.3.0. by @kangphi in #5

Full Changelog: v0.2.1...v0.3.0

Contributors

kangphi

Assets 14

vareffect-v0.3.0-aarch64-apple-darwin.tar.gz

sha256:0779f485c1a0345cd89d944b99118fefb8709d7079e19707e53e72c38d5196d1

3.17 MB 2026-06-17T14:45:32Z
vareffect-v0.3.0-aarch64-apple-darwin.tar.gz.sha256

sha256:dfa4aa90c387bc1e07a987308c8adc25a2c03aa20d690880975c7a0a338dbce9

111 Bytes 2026-06-17T14:45:32Z
vareffect-v0.3.0-aarch64-unknown-linux-gnu.tar.gz

sha256:93cd974b7e2523191d1c0be4bc66fc12b7ab0d8fe5342ded423b96ae302bd10a

3.22 MB 2026-06-17T14:45:40Z
vareffect-v0.3.0-aarch64-unknown-linux-gnu.tar.gz.sha256

sha256:1d95dd3d69ad50e2166ff30a3da9fc0f6fdaeda86a1cadbbdd3add075d13e671

116 Bytes 2026-06-17T14:45:40Z
vareffect-v0.3.0-x86_64-apple-darwin.tar.gz

sha256:74d601ee74470e8be2adca86d8fb3f32bd39c1bdda2c3f3698829c42c6f27b3b

3.38 MB 2026-06-17T14:45:23Z
vareffect-v0.3.0-x86_64-apple-darwin.tar.gz.sha256

sha256:d1cef93436b5a68ab2834147db5a6c09b644ce204b9705a6a5277ae383ec47c0

110 Bytes 2026-06-17T14:45:23Z
vareffect-v0.3.0-x86_64-pc-windows-msvc.zip

sha256:895c8483133fffc1e43599c2141790aea5146481ea229d58c8701f34ce8e786b

2.79 MB 2026-06-17T14:47:23Z
vareffect-v0.3.0-x86_64-pc-windows-msvc.zip.sha256

sha256:0a767d5dfc001c119a4e9bdd576283c68ebf6083866298e58f163902be99e2d3

111 Bytes 2026-06-17T14:47:23Z
vareffect-v0.3.0-x86_64-unknown-linux-gnu.tar.gz

sha256:4c5fd1661a04c80f2d5d5b39ee0d5f27d74aed9cf07cd3c301827d9655ac60f1

3.42 MB 2026-06-17T14:45:32Z
vareffect-v0.3.0-x86_64-unknown-linux-gnu.tar.gz.sha256

sha256:466704c5b0ff724bb0fe11e2bda0ddeb02792c8cd00a276426dd0ccd2b7d644a

115 Bytes 2026-06-17T14:45:32Z
Source code (zip)

2026-06-17T14:35:55Z
Source code (tar.gz)

2026-06-17T14:35:55Z

11 Jun 08:14

kangphi

CNV Support

What's Changed

Cnv support by @kangphi in #3

Full Changelog: v0.1.4...v0.2.1

What's Changed

Cnv support by @kangphi in #3

Full Changelog: v0.1.4...v0.2.1

What's Changed

Cnv support by @kangphi in #3

Full Changelog: v0.1.4...v0.2.1

What's Changed

Cnv support by @kangphi in #3

Full Changelog: v0.1.4...v0.2.1

What's Changed

Cnv support by @kangphi in #3

Full Changelog: v0.1.4...v0.2.1

What's Changed

Cnv support by @kangphi in #3

Full Changelog: v0.1.4...v0.2.1

What's Changed

Cnv support by @kangphi in #3

Full Changelog: v0.1.4...v0.2.1

Contributors

kangphi

Assets 14

04 Jun 13:12

kangphi

Bug fix left alignment

What's Changed

fixed bug in left alignment by @kangphi in #2

Full Changelog: v0.1.3...v0.1.4

What's Changed

fixed bug in left alignment by @kangphi in #2

New Contributors

@kangphi made their first contribution in #2

Full Changelog: v0.1.3...v0.1.4

What's Changed

fixed bug in left alignment by @kangphi in #2

New Contributors

@kangphi made their first contribution in #2

Full Changelog: v0.1.3...v0.1.4

What's Changed

fixed bug in left alignment by @kangphi in #2

New Contributors

@kangphi made their first contribution in #2

Full Changelog: v0.1.3...v0.1.4

What's Changed

fixed bug in left alignment by @kangphi in #2

New Contributors

@kangphi made their first contribution in #2

Full Changelog: v0.1.3...v0.1.4

What's Changed

fixed bug in left alignment by @kangphi in #2

New Contributors

@kangphi made their first contribution in #2

Full Changelog: v0.1.3...v0.1.4

What's Changed

fixed bug in left alignment by @kangphi in #2

New Contributors

@kangphi made their first contribution in #2

Full Changelog: v0.1.3...v0.1.4

Contributors

kangphi

Assets 14

24 Apr 10:07

kangphi

v0.1.3

-Transcript Version lookup and warning pass-through

Error pass through in case input doesn't match the ref FASTA

Full Changelog: v0.1.2...v0.1.3

Full Changelog: v0.1.2...v0.1.3

Full Changelog: v0.1.2...v0.1.3

Full Changelog: v0.1.2...v0.1.3

Full Changelog: v0.1.2...v0.1.3

Full Changelog: v0.1.2...v0.1.3

Full Changelog: v0.1.2...v0.1.3

Assets 14

14 Apr 20:35

kangphi

Documentation Changes

Full Changelog: v0.1.1...v0.1.2

Full Changelog: v0.1.1...v0.1.2

Full Changelog: v0.1.1...v0.1.2

Full Changelog: v0.1.1...v0.1.2

Full Changelog: v0.1.1...v0.1.2

Full Changelog: v0.1.1...v0.1.2

Full Changelog: v0.1.1...v0.1.2

Assets 14

14 Apr 20:16

kangphi

Initial Public Release

Initial Public Release

Full Changelog: https://github.com/LIA-Genomics/vareffect/commits/v0.1.1

Full Changelog: https://github.com/LIA-Genomics/vareffect/commits/v0.1.1

Full Changelog: https://github.com/LIA-Genomics/vareffect/commits/v0.1.1

Full Changelog: https://github.com/LIA-Genomics/vareffect/commits/v0.1.1

Full Changelog: https://github.com/LIA-Genomics/vareffect/commits/v0.1.1

Assets 14