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Changed calling card STRING field to ANNOTATION #148

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Merged
merged 1 commit into from
Jan 29, 2020
Merged

Changed calling card STRING field to ANNOTATION #148

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4 changes: 2 additions & 2 deletions frontend/src/components/trackVis/CallingCardTrack.js
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Original file line number Diff line number Diff line change
Expand Up @@ -143,10 +143,10 @@ class CallingCardTrack extends React.PureComponent {
<tr>
<th scope="col">Value</th>
<th scope="col">Strand</th>
<th scope="col">String</th>
<th scope="col">Annotation</th>
</tr>
</thead>);
const rows = cards.slice(0, 10).map((card,i) => <tr key={i}><td>{card.value}</td><td>{card.strand}</td><td>{card.string}</td></tr>);
const rows = cards.slice(0, 10).map((card,i) => <tr key={i}><td>{card.value}</td><td>{card.strand}</td><td>{card.annotation}</td></tr>);
return <table className="table table-striped table-sm">{head}<tbody>{rows}</tbody></table>;
}

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6 changes: 3 additions & 3 deletions frontend/src/model/CallingCard.ts
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Expand Up @@ -5,7 +5,7 @@ import BedRecord from '../dataSources/bed/BedRecord';
enum CallingCardColumnIndex {
VALUE=3,
STRAND=4,
STRING=5
ANNOTATION=5
};


Expand All @@ -25,15 +25,15 @@ class CallingCard extends Feature {
* Constructs a new CallingCard, given a string from tabix
*
*/
string: any;
annotation: any;
value: number;
relativeX: number; // Store relative position of CallingCard in visualizer
relativeY: number; // Used to find nearest CallingCard to cursor for tooltip; also for downsampling
constructor(bedRecord: BedRecord) {
const locus = new ChromosomeInterval(bedRecord.chr, bedRecord.start, bedRecord.end);
super('', locus, bedRecord[CallingCardColumnIndex.STRAND]);
this.value = Number.parseFloat(bedRecord[CallingCardColumnIndex.VALUE]);
this.string = bedRecord[CallingCardColumnIndex.STRING];
this.annotation = bedRecord[CallingCardColumnIndex.ANNOTATION];
}
}

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