fix: refs not built for imported EDN

from UI form or when using cli in-app graph

Author: logseq-cldwalker

deps/cli/src/logseq/cli/common/mcp/tools.cljs

@@ -126,8 +126,7 @@
     ;; (cljs.pprint/pprint _txs)
     (when error
       (throw (ex-info (str "Error while building import data: " error) {})))
-    (let [tx-meta {::sqlite-export/imported-data? true
-                   :import-db? true}]
+    (let [tx-meta {::sqlite-export/imported-data? true}]
       (ldb/transact! conn (vec (concat init-tx block-props-tx misc-tx)) tx-meta))))
 
 (defn- get-ident [idents title]

src/main/frontend/worker/pipeline.cljs

@@ -518,8 +518,13 @@
         (or from-disk? new-graph?)
         {:tx-report tx-report}
 
+        ;; Rebuild refs for a new DB graph using EDN or when EDN data is imported.
+        ;; Ref rebuilding happens here because transact-pipeline doesn't rebuild refs
+        ;; for these cases
         (or (::gp-exporter/new-graph? tx-meta)
-            (and (::sqlite-export/imported-data? tx-meta) (:import-db? tx-meta)))
+            (and (::sqlite-export/imported-data? tx-meta)
+                 ;; Undo and redo must be handled by default in order to work
+                 (not (:undo? tx-meta)) (not (:redo? tx-meta))))
         (invoke-hooks-for-imported-graph conn tx-report)
 
         :else